RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 OIP5O43482 229 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 TPST2O60704 377 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 GKN3PP0CG01 181 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 HTR2AP28223 471 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PEX2P28328 305 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 RRM2P31350 389 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PTDSS1P48651 473 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 HLCSP50747 726 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 GAS1P54826 345 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF117Q03924 483 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 EPS8Q12929 822 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 RTL4Q6ZR62 310 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PLEKHM3Q6ZWE6 761 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 TSPYL5Q86VY4 417 aaPredicted RBP9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SVOPLQ8N434 492 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PIK3C3Q8NEB9 887 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 EPYCQ99645 322 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 METTL7AQ9H8H3 244 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 HHATLQ9HCP6 504 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 KLRF1Q9NZS2 232 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SAC3D1A6NKF1 404 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 E2F6O75461 281 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 OR5F1O95221 314 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PTGDSP41222 190 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 ACAA2P42765 397 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SMIM11AP58511 58 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 HOXC5Q00444 222 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SNTA1Q13424 505 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 EPHX4Q8IUS5 362 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 TOR1AIP2Q8NFQ8 470 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 OR5K1Q8NHB7 308 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 PAQR8Q8TEZ7 354 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SGCZQ96LD1 299 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 OSBPL11Q9BXB4 747 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 CNOT11Q9UKZ1 510 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 OAZ3Q9UMX2 235 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 CARD8Q9Y2G2 431 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 SAMHD1Q9Y3Z3 626 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 LYVE1Q9Y5Y7 322 aa9.37□□□□□ -0.91
VIPAS39-201ENST00000327028 CPSF4LA6NMK7 179 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CYP7B1O75881 506 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 H1F0P07305 194 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 FPR1P21462 350 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 DNAJA1P31689 397 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CASRP41180 1078 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC6A8P48029 635 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 LIMS1P48059 325 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CDH12P55289 794 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 TAS2R41P59536 307 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 GANABQ14697 944 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 DEFB109BQ30KR1 87 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ENTPD8Q5MY95 495 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 LPCAT4Q643R3 524 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC30A6Q6NXT4 461 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 SHQ1Q6PI26 577 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CYP4Z2PQ8N1L4 340 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 TMCO5AQ8N6Q1 288 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CATSPER1Q8NEC5 780 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 TRIM2Q9C040 744 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 VCX3BQ9H321 246 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CPNE5Q9HCH3 593 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 GPR83Q9NYM4 423 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 RHCGQ9UBD6 479 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 NTNG1Q9Y2I2 539 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 WIF1Q9Y5W5 379 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 TNFRSF11BO00300 401 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 FAAHO00519 579 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 HCRTR2O43614 444 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ADAM11O75078 769 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 GADD45GO95257 159 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF23P17027 643 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 IFNA8P32881 189 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 VHLP40337 213 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 EIF2S3P41091 472 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CASP3P42574 277 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CYB561P49447 251 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 IST1P53990 364 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 C17orf67Q0P5P2 114 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 PIN1Q13526 163 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 COLEC12Q5KU26 742 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 AGAP7PQ5VUJ5 663 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 BICRALQ6AI39 1079 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF613Q6PF04 617 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CBLN3Q6UW01 205 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 ISLR2Q6UXK2 745 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 TMEM179BQ7Z7N9 219 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 APLFQ8IW19 511 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 EME1Q96AY2 570 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 NTNG2Q96CW9 530 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 NRBF2Q96F24 287 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 AGAP4Q96P64 663 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 CIB1Q99828 191 aa9.36□□□□□ -0.91
VIPAS39-201ENST00000327028 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms