RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CAPNS1P04632 268 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 EPHX4Q8IUS5 362 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 FDCSPQ8NFU4 85 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 HPF1Q9NWY4 346 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 KLRF1Q9NZS2 232 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 OAZ3Q9UMX2 235 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 POLHQ9Y253 713 aa13.98□□□□□ -0.17
PRPF3-201ENST00000324862 A0A0G2JMM0 328 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 A0A1W2PPB8 328 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 A0A1W2PRS3 328 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 KIR3DP1A8MWS1 328 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 GNGT2O14610 69 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 HCRTR2O43614 444 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 LDLRP01130 860 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 UBL4AP11441 157 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 PRKACGP22612 351 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 CASP3P42574 277 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 ACAA2P42765 397 aaKnown RBP13.97□□□□□ -0.17
PRPF3-201ENST00000324862 CDH12P55289 794 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 OC90Q02509 493 aaPredicted RBP13.97□□□□□ -0.17
PRPF3-201ENST00000324862 MEP1AQ16819 746 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 ENTPD8Q5MY95 495 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 TBPL2Q6SJ96 375 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 PIWIL3Q7Z3Z3 882 aaKnown RBP13.97□□□□□ -0.17
PRPF3-201ENST00000324862 TMCO5AQ8N6Q1 288 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF527Q8NB42 609 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 PHF10Q8WUB8 498 aaKnown RBP13.97□□□□□ -0.17
PRPF3-201ENST00000324862 SIGLEC12Q96PQ1 595 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 HES7Q9BYE0 225 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 HOXD1Q9GZZ0 328 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 KLHL28Q9NXS3 571 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 CSAG2Q9Y5P2 127 aa13.97□□□□□ -0.17
PRPF3-201ENST00000324862 WDPCPO95876 746 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 NAGAP17050 411 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 TMED10P49755 219 aaKnown RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 SPIBQ01892 262 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 SKP2Q13309 424 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 TOMM34Q15785 309 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 OR2T5Q6IEZ7 315 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 OPN5Q6U736 354 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 OR2T29Q8NH02 315 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 RELTQ969Z4 430 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 TMCO6Q96DC7 493 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 MCHR1Q99705 422 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 ZNF552Q9H707 407 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 METTL7AQ9H8H3 244 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 TRIM45Q9H8W5 580 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 GTPBP1O00178 669 aaKnown RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 CD96P40200 585 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 GAS1P54826 345 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 GPR85P60893 370 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 EFR3AQ14156 821 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 SNCBQ16143 134 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 ABHD17BQ5VST6 288 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 CCDC81Q6ZN84 652 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 SLC15A4Q8N697 577 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 PMM1Q92871 262 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 NPAS1Q99742 590 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 DPH1Q9BZG8 443 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-201ENST00000324862 PROK2Q9HC23 129 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 DNAJB9Q9UBS3 223 aa13.96□□□□□ -0.17
PRPF3-201ENST00000324862 TAF4O00268 1085 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF264O43296 627 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 TCEA1P23193 301 aaKnown RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 MST1P26927 711 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 TLE3Q04726 772 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 EIPR1Q53HC9 387 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 JMJD6Q6NYC1 403 aaPredicted RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF605Q86T29 641 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 CADM2Q8N3J6 435 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 FAM71CQ8NEG0 241 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 CENPNQ96H22 339 aaPredicted RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 PIP5K1AQ99755 562 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 SLC29A1Q99808 456 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 MED11Q9P086 117 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 C6orf203Q9P0P8 240 aaPredicted RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 SAMHD1Q9Y3Z3 626 aaKnown RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 EXPH5Q8NEV8 1989 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 PRRC2CQ9Y520 2896 aaKnown RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 DEAF1O75398 565 aaPredicted RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF23P17027 643 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 RHCEP18577 417 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 OTUD3Q5T2D3 398 aaPredicted RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 MEX3DQ86XN8 651 aaKnown RBP13.95□□□□□ -0.18
PRPF3-201ENST00000324862 SH2D2AQ9NP31 389 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 LYVE1Q9Y5Y7 322 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 HEATR5AQ86XA9 2040 aa13.95□□□□□ -0.18
PRPF3-201ENST00000324862 TRBV4-1A0A0J9YWV2 114 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms