RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 C20orf141Q9NUB4 165 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 SERINC4A6NH21 518 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 CDC42EP2O14613 210 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 CPNE3O75131 537 aaKnown RBP16.94■□□□□ 0.3
USP39-201ENST00000323701 IL33O95760 270 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 ETV5P41161 510 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 SLC35A2P78381 396 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 SLCO6A1Q86UG4 719 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 ZNF441Q8N8Z8 693 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 SUMF1Q8NBK3 374 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 POGLUT1Q8NBL1 392 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 OR8D4Q8NGM9 314 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 PFN4Q8NHR9 129 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 A0A1B0GVG6 124 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 KLF4O43474 513 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 ZNF354AO60765 605 aaPredicted RBP16.94■□□□□ 0.3
USP39-201ENST00000323701 EMP2P54851 167 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 MBOAT2Q6ZWT7 520 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 P3H2Q8IVL5 708 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 NR4A3Q92570 626 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 DTNBP1Q96EV8 351 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 MPP4Q96JB8 637 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 DUSP21Q9H596 190 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.94■□□□□ 0.3
USP39-201ENST00000323701 C14orf105Q9NVL8 296 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 COPS7AQ9UBW8 275 aa16.94■□□□□ 0.3
USP39-201ENST00000323701 TESQ9UGI8 421 aaKnown RBP16.94■□□□□ 0.3
USP39-201ENST00000323701 A0A1B0GWA3 101 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 TTC36A6NLP5 189 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 FMO6PO60774 539 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 ICOSLGO75144 302 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 RFPL3O75679 317 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 UTS2O95399 124 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 CSTAP01040 98 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 HBQ1P09105 142 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 ZNF806P0C7X5 589 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 SLC5A2P31639 672 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 MVKQ03426 396 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 FNDC7Q5VTL7 733 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 ACSM5Q6NUN0 579 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 CBLN3Q6UW01 205 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 BCDIN3DQ7Z5W3 292 aaKnown RBP16.93■□□□□ 0.3
USP39-201ENST00000323701 NAXDQ8IW45 347 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 THAP3Q8WTV1 239 aaPredicted RBP16.93■□□□□ 0.3
USP39-201ENST00000323701 IL4I1Q96RQ9 567 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 VCX3AQ9NNX9 186 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 ATP13A2Q9NQ11 1180 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 FBXO8Q9NRD0 319 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 B3GALT1Q9Y5Z6 326 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 CEPT1Q9Y6K0 416 aa16.93■□□□□ 0.3
USP39-201ENST00000323701 A0A0B4J2E0 115 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 A0A1B0GX12 115 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 CCDC160A6NGH7 325 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 KPNA4O00629 521 aaPredicted RBP16.92■□□□□ 0.3
USP39-201ENST00000323701 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 BROXQ5VW32 411 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 SLX4IPQ5VYV7 408 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 LINC00471Q8N535 108 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 FKBP10Q96AY3 582 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 CRB3Q9BUF7 120 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 ULBP3Q9BZM4 244 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 SLC26A1Q9H2B4 701 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 ARMC7Q9H6L4 198 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 IL20RAQ9UHF4 553 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 CFL2Q9Y281 166 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 REM1O75628 298 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 NGFRP08138 427 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 CXCR4P61073 352 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 RNF4P78317 190 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 COX10Q12887 443 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 TSPAN31Q12999 210 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 C12orf73Q69YU5 71 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 KIRREL2Q6UWL6 708 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 BPHLQ86WA6 291 aaPredicted RBP16.92■□□□□ 0.3
USP39-201ENST00000323701 ZNF540Q8NDQ6 660 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 PIGXQ8TBF5 258 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 ART5Q96L15 291 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 EDEM2Q9BV94 578 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 MEPEQ9NQ76 525 aaPredicted RBP16.92■□□□□ 0.3
USP39-201ENST00000323701 UBQLN4Q9NRR5 601 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 IMPAD1Q9NX62 359 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 SLC39A1Q9NY26 324 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 PTTG2Q9NZH5 202 aa16.92■□□□□ 0.3
USP39-201ENST00000323701 SAGE2PA6NJ88 616 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 FAM20BO75063 409 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 MAKP20794 623 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 PCMT1P22061 227 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 ABCD3P28288 659 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 IFNA8P32881 189 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 CDC42P60953 191 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 ALDH6A1Q02252 535 aaKnown RBP16.91■□□□□ 0.3
USP39-201ENST00000323701 TOP3AQ13472 1001 aaPredicted RBP16.91■□□□□ 0.3
USP39-201ENST00000323701 GINS1Q14691 196 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 RAB39AQ14964 217 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 FAM198BQ6UWH4 519 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 RRM2BQ7LG56 351 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 B3GNT7Q8NFL0 401 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 GNPDA2Q8TDQ7 276 aa16.91■□□□□ 0.3
USP39-201ENST00000323701 NODALQ96S42 347 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms