RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 OSTF1Q92882 214 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 FAM120BQ96EK7 910 aaKnown RBP17.95■□□□□ 0.46
SERF1A-201ENST00000317633 KLHL15Q96M94 604 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 NPAS1Q99742 590 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 ACTR6Q9GZN1 396 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 HOXD1Q9GZZ0 328 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 TUBB1Q9H4B7 451 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 EML4Q9HC35 981 aaKnown RBP17.95■□□□□ 0.46
SERF1A-201ENST00000317633 FBXO34Q9NWN3 711 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 GIN1Q9NXP7 522 aa17.95■□□□□ 0.46
SERF1A-201ENST00000317633 GJE1A6NN92 205 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 H3BNH8 94 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 HMGN2P05204 90 aaKnown RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 LINGO3P0C6S8 592 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 BCKDHAP12694 445 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PAX1P15863 534 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PSMB1P20618 241 aaKnown RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 ELK4P28324 431 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 ADH6P28332 368 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 AGTR1P30556 359 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 RNPS1Q15287 305 aaKnown RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 EXOSC6Q5RKV6 272 aaKnown RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 CCNJQ5T5M9 372 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 WFDC8Q8IUA0 241 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 NATD1Q8N6N6 113 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 STEAP2Q8NFT2 490 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 POC1BQ8TC44 478 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PHOSPHO1Q8TCT1 267 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 TWIST2Q8WVJ9 160 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 CPNE4Q96A23 557 aaPredicted RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PLPPR2Q96GM1 343 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PPP3R2Q96LZ3 170 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 HDHD5Q9BXW7 423 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 PIGUQ9H490 435 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 C12orf49Q9H741 205 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 ATP6V1HQ9UI12 483 aa17.94■□□□□ 0.46
SERF1A-201ENST00000317633 NUP214P35658 2090 aaPredicted RBP17.94■□□□□ 0.46
SERF1A-201ENST00000317633 TRIM64A6NGJ6 449 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 TRIM64BA6NI03 449 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 SCAMP2O15127 329 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 CNOT4O95628 575 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 NUDT14O95848 222 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 KRT16P08779 473 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 EFNA1P20827 205 aaPredicted RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 SFTPDP35247 375 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 LASP1Q14847 261 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 CD226Q15762 336 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 ZNF611Q8N823 705 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 ADAMTS15Q8TE58 950 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 EPS8L3Q8TE67 593 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 CDS1Q92903 461 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 OTUB1Q96FW1 271 aaPredicted RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 TACO1Q9BSH4 297 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 SIRT3Q9NTG7 399 aaPredicted RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 ATAD3AQ9NVI7 634 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 FAF1Q9UNN5 650 aaPredicted RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 TRAF6Q9Y4K3 522 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 SNX8Q9Y5X2 465 aa17.93■□□□□ 0.46
SERF1A-201ENST00000317633 FN1P02751 2386 aaKnown RBP17.93■□□□□ 0.46
SERF1A-201ENST00000317633 HS3ST1O14792 307 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 NPHS1O60500 1241 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 P2RX1P51575 399 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 ZNF117Q03924 483 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 ZNF239Q16600 458 aaKnown RBP17.92■□□□□ 0.46
SERF1A-201ENST00000317633 LSM12Q3MHD2 195 aaKnown RBP17.92■□□□□ 0.46
SERF1A-201ENST00000317633 CDC73Q6P1J9 531 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 OR56A1Q8NGH5 318 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 RNF128Q8TEB7 428 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 IGFBPL1Q8WX77 278 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 ROBO4Q8WZ75 1007 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 ACTRT3Q9BYD9 372 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 GP6Q9HCN6 339 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 NGBQ9NPG2 151 aa17.92■□□□□ 0.46
SERF1A-201ENST00000317633 GPC6Q9Y625 555 aaPredicted RBP17.92■□□□□ 0.46
SERF1A-201ENST00000317633 PIP5K1BO14986 540 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 LYPLA1O75608 230 aaPredicted RBP17.91■□□□□ 0.46
SERF1A-201ENST00000317633 CCT3P49368 545 aaKnown RBP17.91■□□□□ 0.46
SERF1A-201ENST00000317633 SUMO3P55854 103 aaPredicted RBP17.91■□□□□ 0.46
SERF1A-201ENST00000317633 PPP2R2BQ00005 443 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 FOXF1Q12946 379 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 TP53BP2Q13625 1128 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 SPDYE7PQ495Y7 208 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 OR7A2PQ8NGA2 310 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 FBXO27Q8NI29 283 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 OR5P2Q8WZ92 322 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 APOPT1Q96IL0 206 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 PRPF18Q99633 342 aaKnown RBP17.91■□□□□ 0.46
SERF1A-201ENST00000317633 TMEM204Q9BSN7 226 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 ZNF701Q9NV72 531 aaPredicted RBP17.91■□□□□ 0.46
SERF1A-201ENST00000317633 MKS1Q9NXB0 559 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 KLHL13Q9P2N7 655 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 ACTL7BQ9Y614 415 aa17.91■□□□□ 0.46
SERF1A-201ENST00000317633 FREM1Q5H8C1 2179 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 PRR14LQ5THK1 2151 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 USF3Q68DE3 2245 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 TMEM233B4DJY2 109 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 GTPBP1O00178 669 aaKnown RBP17.9■□□□□ 0.46
SERF1A-201ENST00000317633 ZNF195O14628 629 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 PRKD3O94806 890 aa17.9■□□□□ 0.46
SERF1A-201ENST00000317633 PLAUP00749 431 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms