RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 CNIH4Q9P003 139 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 DAPP1Q9UN19 280 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 IGHV1OR21-1A0A087WYE8 117 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 KDM4EB2RXH2 506 aaPredicted RBP13.16□□□□□ -0.3
VRK3-201ENST00000316763 CTDSP2O14595 271 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 RGS5O15539 181 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 FCMRO60667 390 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 CPMP14384 443 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 TRHRP34981 398 aaPredicted RBP13.16□□□□□ -0.3
VRK3-201ENST00000316763 MBOAT2Q6ZWT7 520 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 MAP3K3Q99759 626 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 CHRNA10Q9GZZ6 450 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 TRAPPC4Q9Y296 219 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
VRK3-201ENST00000316763 SLC22A7Q9Y694 548 aa13.16□□□□□ -0.3
VRK3-201ENST00000316763 TLCD2A6NGC4 264 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 SLC9B1P1A6NJY1 282 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 IL1AP01583 271 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 HMGN1P05114 100 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 THBS1P07996 1170 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 TNFSF8P32971 234 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 RUNX2Q13950 521 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 OR4C6Q8NH72 309 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 HPS1Q92902 700 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 CD180Q99467 661 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 ZFHX2Q9C0A1 2572 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 WWP2O00308 870 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 SLC30A4O14863 429 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 HCRTR1O43613 425 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 GDF9O60383 454 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 GAS1P54826 345 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 GFERP55789 205 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 OR1D5P58170 312 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 GPLD1P80108 840 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 MAP4K2Q12851 820 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 DUSP8Q13202 625 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 NKAIN2Q5VXU1 208 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 TMPRSS11AQ6ZMR5 421 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 NKAIN4Q8IVV8 208 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 FAM181AQ8N9Y4 354 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 UFD1Q92890 307 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 PIGUQ9H490 435 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 TXNL4BQ9NX01 149 aaKnown RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 IL20Q9NYY1 176 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 H2AFY2Q9P0M6 372 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 C19orf53Q9UNZ5 99 aaPredicted RBP13.15□□□□□ -0.3
VRK3-201ENST00000316763 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 GPR52Q9Y2T5 361 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
VRK3-201ENST00000316763 LY6G6EA0A0G2JKS1 128 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 SIGLEC6O43699 453 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CDRT1O95170 752 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 MYF5P13349 255 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 PNLIPP16233 465 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CDH11P55287 796 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 HOXC5Q00444 222 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 TPBGQ13641 420 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 DUSP5Q16690 384 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CLEC12AQ5QGZ9 265 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 ZNF836Q6ZNA1 936 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 OR4N5Q8IXE1 308 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 NRMQ8IXM6 262 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CARFQ8N187 725 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 ARHGEF39Q8N4T4 335 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 KCTD7Q96MP8 289 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 TGM7Q96PF1 710 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 SDF2Q99470 211 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 BARHL1Q9BZE3 327 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 CMAHPQ9Y471 501 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 U3KQA8 63 aa13.14□□□□□ -0.31
VRK3-201ENST00000316763 A0A087WV62 115 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 C4orf47A7E2U8 309 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SNPHO15079 494 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 SURF4O15260 269 aa13.13□□□□□ -0.31
VRK3-201ENST00000316763 STX11O75558 287 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms