RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MAL2Q969L2 176 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 WDR92Q96MX6 357 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SMDT1Q9H4I9 107 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 NLKQ9UBE8 527 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR5K3A6NET4 321 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CD34P28906 385 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 EIF2S3P41091 472 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CLCNKAP51800 687 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SLC10A2Q12908 348 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ECH1Q13011 328 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR4D1Q15615 310 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CARTPTQ16568 116 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR7G2Q8NG99 324 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR56B1Q8NGI3 324 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF285Q96NJ3 590 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SLC30A3Q99726 388 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 C1orf123Q9NWV4 160 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 LAMP3Q9UQV4 416 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 J3QLW9 94 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF19P17023 458 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 HNF1BP35680 557 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 EIF1P41567 113 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 STK19P49842 368 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CD300LDQ6UXZ3 194 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 MEPCEQ7L2J0 689 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZSCAN4Q8NAM6 433 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 TREM1Q9NP99 234 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 NRIP3Q9NQ35 241 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SIRT5Q9NXA8 310 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ICKQ9UPZ9 632 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 FGF9P31371 208 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR4D2P58180 307 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 MFGE8Q08431 387 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 BCL7AQ4VC05 210 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CD163Q86VB7 1156 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CNIH3Q8TBE1 160 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 COQ8BQ96D53 544 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 IGSF21Q96ID5 467 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 TXN2Q99757 166 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SLC25A19Q9HC21 320 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 A0A0G2JMZ2 1700 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 LRRC37A2A6NM11 1700 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 TRAV1-2A0A0B4J238 106 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 STC2O76061 302 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CD68P34810 354 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 MS4A2Q01362 244 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 MSMO1Q15800 293 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 FAM26DQ5JW98 314 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 C3orf33Q6P1S2 294 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 VITQ6UXI7 678 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SIX5Q8N196 739 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 NPWQ8N729 165 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PPP1R35Q8TAP8 253 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 TEX10Q9NXF1 929 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CSN2P05814 226 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 HCKP08631 526 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 STT3AP46977 705 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SLC25A30Q5SVS4 291 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 GLB1L2Q8IW92 636 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR4E2Q8NGC2 313 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SLC39A13Q96H72 371 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 PCYT2Q99447 389 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CTRCQ99895 268 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ACPTQ9BZG2 426 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SMCO3A2RU48 225 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF217O75362 1048 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 IL10RAQ13651 578 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 NDUFAF5Q5TEU4 345 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 FAM185AQ8N0U4 392 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 BCL2L10Q9HD36 194 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ERVK-18Q9QC07 812 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 V9GY05 133 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 PTPRZ1P23471 2315 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 RBMXL2O75526 392 aaKnown RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 JTBO76095 146 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 KCNK2O95069 426 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ITGA5P08648 1049 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 THBS3P49746 956 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CGB2Q6NT52 195 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 MBOAT2Q6ZWT7 520 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TRMT10AQ8TBZ6 339 aaKnown RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 FCF1Q9Y324 198 aaKnown RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 NPIPB8E9PQR5 432 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CNR2P34972 360 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 TSSK4Q6SA08 328 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR2L8Q8NGY9 312 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 OR5K2Q8NHB8 316 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 C22orf15Q8WYQ4 148 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CHMP1AQ9HD42 196 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-202ENST00000312481 ADM5C9JUS6 153 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 CTXN2P0C2S0 81 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 SDC1P18827 310 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 MC3RP41968 323 aa8.3□□□□□ -1.08
COL6A5-202ENST00000312481 GIPRP48546 466 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms