RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 HTR2AP28223 471 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 ADARB1P78563 741 aaKnown RBP20.7■□□□□ 0.9
IRF3-201ENST00000309877 TTC23Q5W5X9 447 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 GDF7Q7Z4P5 450 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 SLC22A8Q8TCC7 542 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 ANKRD60Q9BZ19 345 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 TBL1XR1Q9BZK7 514 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 RIBC2Q9H4K1 309 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 PAPOLBQ9NRJ5 636 aaKnown RBP20.7■□□□□ 0.9
IRF3-201ENST00000309877 FAM118AQ9NWS6 357 aa20.7■□□□□ 0.9
IRF3-201ENST00000309877 CDV3Q9UKY7 258 aaKnown RBP20.7■□□□□ 0.9
IRF3-201ENST00000309877 SDK2Q58EX2 2172 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 LOC101059948A0A1B0GTJ6 334 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 NADKO95544 446 aaPredicted RBP20.69■□□□□ 0.9
IRF3-201ENST00000309877 NGFRP08138 427 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 ICAM2P13598 275 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 NAGAP17050 411 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 F8A1P23610 371 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 KCNAB2Q13303 367 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 NDUFAF6Q330K2 333 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 APOOLQ6UXV4 268 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 RRM2BQ7LG56 351 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 TMPRSS7Q7RTY8 843 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 CHERPQ8IWX8 916 aaKnown RBP20.69■□□□□ 0.9
IRF3-201ENST00000309877 TOR1AIP2Q8NFQ8 470 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 TRIM2Q9C040 744 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 SLC7A7Q9UM01 511 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 MGAT4BQ9UQ53 548 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 POFUT2Q9Y2G5 429 aa20.69■□□□□ 0.9
IRF3-201ENST00000309877 TERTO14746 1132 aaKnown RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 OR2J2O76002 312 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 GASTP01350 101 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 CELA2AP08217 269 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 POU2F1P14859 743 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 CBLP22681 906 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 RYKP34925 604 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 ACAA2P42765 397 aaKnown RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 TMED10P49755 219 aaKnown RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 CD226Q15762 336 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 FNDC7Q5VTL7 733 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 ZNF770Q6IQ21 691 aaPredicted RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 ZNF730Q6ZMV8 503 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 IL22RA1Q8N6P7 574 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 OR4K5Q8NGD3 323 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 OR5M3Q8NGP4 307 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 RNF217Q8TC41 542 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 GTPBP3Q969Y2 492 aaKnown RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 TMCO6Q96DC7 493 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 NR1H4Q96RI1 486 aaPredicted RBP20.68■□□□□ 0.9
IRF3-201ENST00000309877 NIPSNAP1Q9BPW8 284 aa20.68■□□□□ 0.9
IRF3-201ENST00000309877 A0A1W2PQD3 144 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ZNF264O43296 627 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ZNF354AO60765 605 aaPredicted RBP20.67■□□□□ 0.9
IRF3-201ENST00000309877 HPP00738 406 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ENDOUP21128 410 aaKnown RBP20.67■□□□□ 0.9
IRF3-201ENST00000309877 KRT80Q6KB66 452 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ZNF613Q6PF04 617 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 MARCH3Q86UD3 253 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 RAB43Q86YS6 212 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 POGLUT1Q8NBL1 392 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 NKD1Q969G9 470 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ARSGQ96EG1 525 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 DLL3Q9NYJ7 618 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 RPS6KB2Q9UBS0 482 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 FBXL4Q9UKA2 621 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 A0A087WUU8 490 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 LOC100130705A0A1B0GUX0 176 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 CDRT15L2A8MXV6 281 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ALG1L2C9J202 215 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 NDUFB5O43674 189 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 ADAP00813 363 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 THY1P04216 161 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 GNAO1P09471 354 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 EVI2BP34910 448 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 IFNGR2P38484 337 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 CLK3P49761 638 aaKnown RBP20.67■□□□□ 0.9
IRF3-201ENST00000309877 UGT2B15P54855 530 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 FBXW4P57775 412 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 NKAIN4Q8IVV8 208 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 SLC15A4Q8N697 577 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 TMCO5AQ8N6Q1 288 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 FAM71CQ8NEG0 241 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 EXOSC3Q9NQT5 275 aaKnown RBP20.67■□□□□ 0.9
IRF3-201ENST00000309877 P4HTMQ9NXG6 502 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 UBAP1Q9NZ09 502 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 CARD8Q9Y2G2 431 aa20.67■□□□□ 0.9
IRF3-201ENST00000309877 KNTC1P50748 2209 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.66■□□□□ 0.9
IRF3-201ENST00000309877 FADS1O60427 444 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 GFRA3O60609 400 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 ADAM11O75078 769 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 CLIC3O95833 236 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 ITGAMP11215 1152 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 MYF6P23409 242 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 POLR2IP36954 125 aaKnown RBP20.66■□□□□ 0.9
IRF3-201ENST00000309877 COPZ1P61923 177 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 PGBD2Q6P3X8 592 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 NUP54Q7Z3B4 507 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 APLFQ8IW19 511 aaPredicted RBP20.66■□□□□ 0.9
IRF3-201ENST00000309877 CADM2Q8N3J6 435 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms