RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 NXPE2Q96DL1 559 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-201ENST00000309428 PITX2Q99697 317 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 ARPC5LQ9BPX5 153 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 SYNPO2LQ9H987 977 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 SLC35C2Q9NQQ7 365 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 EXOSC1Q9Y3B2 195 aaKnown RBP11.84□□□□□ -0.51
RETREG3-201ENST00000309428 PTPRZ1P23471 2315 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-201ENST00000309428 GPR179Q6PRD1 2367 aa11.84□□□□□ -0.51
RETREG3-201ENST00000309428 IGLV3-16A0A075B6K0 115 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 IRGMA1A4Y4 181 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 RAD1O60671 282 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 HOXB2P14652 356 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 ELAVL4P26378 380 aaKnown RBP11.83□□□□□ -0.51
RETREG3-201ENST00000309428 UBE2MP61081 183 aaKnown RBP11.83□□□□□ -0.51
RETREG3-201ENST00000309428 PUM1Q14671 1186 aaKnown RBP eCLIP11.83□□□□□ -0.51
RETREG3-201ENST00000309428 C17orf107Q6ZR85 190 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 GPR135Q8IZ08 494 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 LINC01555Q8NAE3 123 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 OR5J2Q8NH18 312 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 UPRTQ96BW1 309 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 TM4SF18Q96CE8 201 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 TOX2Q96NM4 488 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 PLA2G2FQ9BZM2 168 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 RCE1Q9Y256 329 aa11.83□□□□□ -0.51
RETREG3-201ENST00000309428 A0A0A6YYJ9 748 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 LRRN3E7EW58 273 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 SLC16A5O15375 505 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 PRODHO43272 600 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 PRICKLE3O43900 615 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 NUDT14O95848 222 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 RPN2P04844 631 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 HPGDP15428 266 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ASAH1Q13510 395 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 SCGB2B2Q4G0G5 96 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 TMEM240Q5SV17 173 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ACOT4Q8N9L9 421 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 OR5T3Q8NGG3 340 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 OR4D11Q8NGI4 311 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 FGF14Q92915 247 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 DHRS9Q9BPW9 319 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 GLIPR2Q9H4G4 154 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 FGF22Q9HCT0 170 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ANKRD61A6NGH8 418 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 RNASET2O00584 256 aaKnown RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 FLRT2O43155 660 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 SCO2O43819 266 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 B4GALT2O60909 372 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 GNRH1P01148 92 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ITGB7P26010 798 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 CD79BP40259 229 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ST3GAL3Q11203 375 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 PRRT3Q5FWE3 981 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 FAM180AQ6UWF9 173 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 GRAMD2AQ8IUY3 354 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 OR2L2Q8NH16 312 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 CAMK1GQ96NX5 476 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 ALG8Q9BVK2 526 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 TMEM168Q9H0V1 697 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 IL21RQ9HBE5 538 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 GPN1Q9HCN4 374 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 C1GALT1Q9NS00 363 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 TMEM45AQ9NWC5 275 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 NPAP1Q9NZP6 1156 aa11.83□□□□□ -0.52
RETREG3-201ENST00000309428 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
RETREG3-201ENST00000309428 RGS13O14921 159 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 NPC1O15118 1278 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 DNAJB6O75190 326 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 KLF8O95600 359 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SOD1P00441 154 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 HSD3B1P14060 373 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SLC1A3P43003 542 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PSMD4P55036 377 aaKnown RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 PLK5Q496M5 336 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 GGTA1PQ4G0N0 100 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 LIN54Q6MZP7 749 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 NANOGP1Q8N7R0 232 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 TOR1AIP2Q8NFQ8 470 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 ZMYND19Q96E35 227 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 SEC22CQ9BRL7 303 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 KCMF1Q9P0J7 381 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 CFAP54Q96N23 3096 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 TCF20Q9UGU0 1960 aaKnown RBP11.82□□□□□ -0.52
RETREG3-201ENST00000309428 MAOBP27338 520 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 BCL6P41182 706 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 MNDAP41218 407 aa11.82□□□□□ -0.52
RETREG3-201ENST00000309428 AKR1C2P52895 323 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms