RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MYNNQ9NPC7 610 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 NECTIN3Q9NQS3 549 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 PRTFDC1Q9NRG1 225 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 FAM53CQ9NYF3 392 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 PLA2G3Q9NZ20 509 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 MARCOQ9UEW3 520 aaPredicted RBP7.63□□□□□ -1.19
CHD6-201ENST00000309279 DTX4Q9Y2E6 619 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 POLR3HQ9Y535 204 aaPredicted RBP7.63□□□□□ -1.19
CHD6-201ENST00000309279 COPG1Q9Y678 874 aaKnown RBP7.63□□□□□ -1.19
CHD6-201ENST00000309279 KCNMB2Q9Y691 235 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 BOD1L1Q8NFC6 3051 aa7.63□□□□□ -1.19
CHD6-201ENST00000309279 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 BSNQ9UPA5 3926 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 GNG14A0A1W2PPG7 69 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 FAM230AA0A1W2PPH8 454 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 C1orf226A1L170 272 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 CDC14CA4D256 554 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 SLC22A31A6NKX4 558 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 WASHC1A8K0Z3 465 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 TCP11X1B4DZS4 312 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 SDHDO14521 159 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 FGF17O60258 216 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 EDF1O60869 148 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 NR2F6P10588 404 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 KITP10721 976 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 BCKDHAP12694 445 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 DRD2P14416 443 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 MAOAP21397 527 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 OTX2P32243 289 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 PCYT1AP49585 367 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 CLDN8P56748 225 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 TAS2R50P59544 299 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 RPL38P63173 70 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 CXADRP78310 365 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 SLC13A2Q13183 592 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 MAD2L1Q13257 205 aaPredicted RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 SERTAD2Q14140 314 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 HEPACAMQ14CZ8 416 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 NTRK2Q16620 822 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 DECR1Q16698 335 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 GALNTL6Q49A17 601 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 PLAC9Q5JTB6 97 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 ATP1A1-AS1Q5TC04 95 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 OR52E8Q6IFG1 317 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 FAM71E1Q6IPT2 247 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 OGFOD2Q6N063 350 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 SLC48A1Q6P1K1 146 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 UTS2BQ765I0 119 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 NDUFAF7Q7L592 441 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 CPEB2Q7Z5Q1 589 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 ANKRD37Q7Z713 158 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 ASCC1Q8N9N2 400 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 POC5Q8NA72 575 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 FNDC5Q8NAU1 212 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 TSLPQ969D9 159 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 RASD2Q96D21 266 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 OPALINQ96PE5 141 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 INTS14Q96SY0 518 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 WDR77Q9BQA1 342 aaPredicted RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 FAIM2Q9BWQ8 316 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 EBPLQ9BY08 206 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 QRSL1Q9H0R6 528 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 VCX2Q9H322 139 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 WDR41Q9HAD4 459 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD6-201ENST00000309279 GIMAP4Q9NUV9 329 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 ASIC5Q9NY37 505 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 HEY2Q9UBP5 337 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 C19orf25Q9UFG5 118 aaPredicted RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 EXO1Q9UQ84 846 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 SAMHD1Q9Y3Z3 626 aaKnown RBP7.62□□□□□ -1.19
CHD6-201ENST00000309279 USH1CQ9Y6N9 552 aa7.62□□□□□ -1.19
CHD6-201ENST00000309279 PIEZO2Q9H5I5 2752 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 IGHV1-45A0A0A0MS14 117 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 ARGFXA6NJG6 315 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 PEX12O00623 359 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 AQP7O14520 342 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 LDB3O75112 727 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 PRKRAO75569 313 aaKnown RBP7.61□□□□□ -1.19
CHD6-201ENST00000309279 GPR75O95800 540 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 HPP00738 406 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 ITGB2P05107 769 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 YES1P07947 543 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 IL3P08700 152 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 COX6A1P12074 109 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 SDC1P18827 310 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 DDCP20711 480 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 AGAP20933 346 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 TUBG1P23258 451 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 TACR1P25103 407 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 EPHA3P29320 983 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 CCT3P49368 545 aaKnown RBP7.61□□□□□ -1.19
CHD6-201ENST00000309279 ENTPD1P49961 510 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 SOX8P57073 446 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 ERVK-8P63133 956 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 FOLH1Q04609 750 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 SNTB2Q13425 540 aaKnown RBP7.61□□□□□ -1.19
CHD6-201ENST00000309279 ART3Q13508 389 aa7.61□□□□□ -1.19
CHD6-201ENST00000309279 ATP1A4Q13733 1029 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms