RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 HCSTQ9UBK5 93 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 CTDSP2O14595 271 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 RDH16O75452 317 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 INHBEP58166 350 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 SLC14A1Q13336 389 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 GALEQ14376 348 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 WDR45BQ5MNZ6 344 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 EXOSC6Q5RKV6 272 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP38-201ENST00000307017 TIFABQ6ZNK6 161 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 IRF7Q92985 503 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 TUBA1CQ9BQE3 449 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 RTP3Q9BQQ7 232 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 OSGIN1Q9UJX0 560 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 TOR1AO14656 332 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 SF3A2Q15428 464 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 DPY19L2P1Q6NXN4 242 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 OR4K5Q8NGD3 323 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 NOX3Q9HBY0 568 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 ANKRD10Q9NXR5 420 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 A0A1W2PQ09 198 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 G3V2L1 256 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 GLI4P10075 376 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 PPT1P50897 306 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 POLR2HP52434 150 aaKnown RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 FOXK1P85037 733 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 POU4F2Q12837 409 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 LIX1LQ8IVB5 337 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 NPY6RQ99463 290 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 OSGIN2Q9Y236 505 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 CLDN6P56747 220 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 OR5H6Q8NGV6 325 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 ARL11Q969Q4 196 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 C1orf74Q96LT6 269 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 H7C1Q1 480 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 OR7A17O14581 309 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 ZNF780AO75290 641 aaPredicted RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 C7P10643 843 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 ZP2Q05996 745 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 PRAMEF9Q5VWM5 478 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 MEDAGQ5VYS4 303 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 PCYT1BQ9Y5K3 369 aaPredicted RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 MYO18AQ92614 2054 aaKnown RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 VSTM2BA6NLU5 285 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 M0QYG6 137 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 EPOP01588 193 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 HLA-AP01891 365 aaKnown RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 MAOAP21397 527 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 SLC5A12Q1EHB4 618 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 FANCFQ9NPI8 374 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 SPHK2Q9NRA0 654 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 INIPQ9NRY2 104 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 FNIP2Q9P278 1114 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 KLHL21Q9UJP4 597 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 RCE1Q9Y256 329 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 FER1L6Q2WGJ9 1857 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 CEBPZOSA8MTT3 80 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 VSTM5A8MXK1 200 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 B3GALT4O96024 378 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 APOA2P02652 100 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 FCRLAQ7L513 359 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 PAPD5Q8NDF8 572 aaKnown RBP11.9□□□□□ -0.5
USP38-201ENST00000307017 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
USP38-201ENST00000307017 TGFBR1P36897 503 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 COQ5Q5HYK3 327 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 TMEM64Q6YI46 380 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 UEVLDQ8IX04 471 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 KDM8Q8N371 416 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 SLA2Q9H6Q3 261 aa11.9□□□□□ -0.51
USP38-201ENST00000307017 A0A0A6YYC8 382 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 I3L1I5 382 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 JUPP14923 745 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 KCNE1P15382 129 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 ACTA2P62736 377 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 RPS25P62851 125 aaKnown RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 ACTG2P63267 376 aa11.89□□□□□ -0.51
USP38-201ENST00000307017 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
USP38-201ENST00000307017 EOGTQ5NDL2 527 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms