RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MICAQ29983 383 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 AGAP7PQ5VUJ5 663 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PRAMEF8Q5VWM4 474 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PRAMEF7Q5VXH5 474 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TECPR1Q7Z6L1 1165 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NRMQ8IXM6 262 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ACBD7Q8N6N7 88 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 STT3BQ8TCJ2 826 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 C22orf15Q8WYQ4 148 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NT5C3BQ969T7 300 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TSACCQ96A04 125 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 SYT3Q9BQG1 590 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MINDY3Q9H8M7 445 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 INPP5EQ9NRR6 644 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 COL16A1Q07092 1604 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 FAM171A2A8MVW0 826 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF736B4DX44 427 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 SLC16A5O15375 505 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GAAP10253 952 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TP53I3Q53FA7 332 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 UEVLDQ8IX04 471 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 IL1F10Q8WWZ1 152 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PEX11GQ96HA9 241 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ARPC1BO15143 372 aaKnown RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 VEGFDO43915 354 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TP53P04637 393 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RETP07949 1114 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PPP3CBP16298 524 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 APLNRP35414 380 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 WNT4P56705 351 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TAP2Q03519 686 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 C6orf89Q6UWU4 347 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GPR155Q7Z3F1 870 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 L3MBTL4Q8NA19 623 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GCDHQ92947 438 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 KLHDC7BQ96G42 594 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TMEM175Q9BSA9 504 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ACTL6BO94805 426 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GSRP00390 522 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 P04436 131 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 KITLGP21583 273 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 REEP5Q00765 189 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 C18orf21Q32NC0 220 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 UNC50Q53HI1 259 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 CES4AQ5XG92 561 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 DPY19L2P1Q6NXN4 242 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TMEM19Q96HH6 336 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 WDR92Q96MX6 357 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF251Q9BRH9 671 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 CNTNAP3Q9BZ76 1288 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PDE7BQ9NP56 450 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 COQ4Q9Y3A0 265 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NFS1Q9Y697 457 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ANKRD28O15084 1053 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 YY2O15391 372 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MMP7P09237 267 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GJA5P36382 358 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RFC3P40938 356 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 CXCR4P61073 352 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 TLE1Q04724 770 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 PIP5KL1Q5T9C9 394 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 UQCC3Q6UW78 93 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NXPE4Q6UWF7 544 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 B3GLCTQ6Y288 498 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RABEPKQ7Z6M1 372 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR4N5Q8IXE1 308 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF610Q8N9Z0 462 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR2A12Q8NGT7 310 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 SLC2A12Q8TD20 617 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 CREB3L4Q8TEY5 395 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NECTIN4Q96NY8 510 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 UHRF1Q96T88 793 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR51J1Q9H342 316 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RTCAO00442 366 aaKnown RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RAB3DO95716 219 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MELKQ14680 651 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 SF3A2Q15428 464 aaKnown RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 UPP1Q16831 310 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 C14orf80Q86SX3 495 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR14L1PQ8NHC6 308 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 THAP7Q9BT49 309 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ZDHHC7Q9NXF8 308 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 VSX1Q9NZR4 365 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ENPP5Q9UJA9 477 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RGPD8O14715 1765 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MEIS3P2A8K0S8 358 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 COCHO43405 550 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 RNGTTO60942 597 aaKnown RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 ALX3O95076 343 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NAT1P18440 290 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GATMP50440 423 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 NKX3-2P78367 333 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 IER5LQ5T953 404 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MAMDC2Q7Z304 686 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-201ENST00000298875 SULF2Q8IWU5 870 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR1M1Q8NGA1 313 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 OR2T4Q8NH00 348 aa5.25□□□□□ -1.57
CPSF2-201ENST00000298875 GIMAP1Q8WWP7 306 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms