RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 TSPAN6O43657 245 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 CXCL14O95715 111 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 WDPCPO95876 746 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 CLUP10909 449 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 CBR1P16152 277 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 AP1S2P56377 157 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 OR12D2P58182 307 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 HYAL4Q2M3T9 481 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 TBC1D19Q8N5T2 526 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 ABHD4Q8TB40 342 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 SORCS1Q8WY21 1168 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 DMRT3Q9NQL9 472 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 SEMA4GQ9NTN9 838 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
SKA3-201ENST00000298260 PLXNB3Q9ULL4 1909 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 CEP290O15078 2479 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ZNF106Q9H2Y7 1883 aaKnown RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 TRBV23-1A0A0A0MS06 115 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ADAM12O43184 909 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 UBL3O95164 117 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 GYPBP06028 91 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ZNF35P13682 527 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 DCTDP32321 178 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 VEGFBP49765 207 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 TBPL1P62380 186 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 SP140Q13342 867 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 RBMS2Q15434 407 aaKnown RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 POM121L1PQ3SYA9 428 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ENTPD8Q5MY95 495 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PM20D2Q8IYS1 436 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 GNPDA2Q8TDQ7 276 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 MNTQ99583 582 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 TAS2R3Q9NYW6 316 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 FBXL4Q9UKA2 621 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 EDARQ9UNE0 448 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 KCNE3Q9Y6H6 103 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 DENND4AQ7Z401 1863 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ABHD14A-ACY1A0A1B0GW23 586 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PPM1DO15297 605 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 NFATC1O95644 943 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PCSK2P16519 638 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 TM4SF4P48230 202 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 MMP15P51511 669 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 GK2Q14410 553 aaPredicted RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 HFEQ30201 348 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ACSM3Q53FZ2 586 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 BEX5Q5H9J7 111 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 HES5Q5TA89 166 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 SLITRK4Q8IW52 837 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 CMTM4Q8IZR5 234 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 ZNF671Q8TAW3 534 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 SAMD8Q96LT4 415 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 OR51V1Q9H2C8 321 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 STARD7Q9NQZ5 370 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 H2AFY2Q9P0M6 372 aaPredicted RBP12.56□□□□□ -0.4
SKA3-201ENST00000298260 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
SKA3-201ENST00000298260 VWA8A3KMH1 1905 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 DAPL1A0PJW8 107 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 SLC38A8A6NNN8 435 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 CDC42EP2O14613 210 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 RB1P06400 928 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 TRHRP34981 398 aaPredicted RBP12.55□□□□□ -0.4
SKA3-201ENST00000298260 MEOX2P50222 304 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 TAS2R41P59536 307 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 RPS15P62841 145 aaKnown RBP12.55□□□□□ -0.4
SKA3-201ENST00000298260 GUCA2BQ16661 112 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 ZNF750Q32MQ0 723 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 MPP7Q5T2T1 576 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 HECTD3Q5T447 861 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 LYPLAL1Q5VWZ2 237 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 LRRN1Q6UXK5 716 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
SKA3-201ENST00000298260 ZNF480Q8WV37 535 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 NEURL3Q96EH8 262 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 SCLYQ96I15 445 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
SKA3-201ENST00000298260 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
SKA3-201ENST00000298260 PLCL2Q9UPR0 1127 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 UGDHO60701 494 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 IGHA1P01876 353 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 CHRM4P08173 479 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 NPPBP16860 134 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 PYCR1P32322 319 aa12.55□□□□□ -0.4
SKA3-201ENST00000298260 TNFRSF17Q02223 184 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms