RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SNRPD1P62314 119 aaKnown RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 TEAD2Q15562 447 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 C19orf48Q6RUI8 117 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 FAM26EQ8N5C1 309 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF354BQ96LW1 612 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CACNA1IQ9P0X4 2223 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 RPS10-NUDT3A0A1W2PQS6 291 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF98A6NK75 572 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 TMEM229AB2RXF0 380 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 H7C0S8 307 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SGK494L7N484 410 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 QSOX1O00391 747 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ANXA11P50995 505 aaKnown RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 EIF2B5Q13144 721 aaKnown RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 HBMQ6B0K9 141 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SDR16C5Q8N3Y7 309 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 HERVK_113Q902F9 699 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ADAT1Q9BUB4 502 aaKnown RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 KRBOX1C9JBD0 128 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 FLRT2O43155 660 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SGCEO43556 437 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ATG13O75143 517 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 RAB3AP20336 220 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 RPL3P39023 403 aaKnown RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 PSMB10P40306 273 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 PITPNAQ00169 270 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 B4GALNT1Q00973 533 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 PLA1AQ53H76 456 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 TPRG1Q6ZUI0 275 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 LINC00518Q8N0U6 118 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 CHCHD4Q8N4Q1 142 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 OR56B4Q8NH76 319 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 LILRB1Q8NHL6 650 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 UBTD2Q8WUN7 234 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SNX33Q8WV41 574 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 NRTNQ99748 197 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GHITMQ9H3K2 345 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GPR160Q9UJ42 338 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 LILRB3O75022 631 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 CLDN2P57739 230 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SORDQ00796 357 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 E2F1Q01094 437 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GPM6BQ13491 265 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 KCNC3Q14003 757 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 OCLNQ16625 522 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GPAT4Q86UL3 456 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 TMEM99Q8N816 258 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 OR10K1Q8NGX5 313 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 C4orf36Q96KX1 117 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 TREM1Q9NP99 234 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 POMT2Q9UKY4 750 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 KPNA3O00505 521 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 UBXN7O94888 489 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 RHOP08100 348 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ANKRD34CP0C6C1 535 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ZP3P21754 424 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ACADLP28330 430 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 MAPK9P45984 424 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GSG1Q2KHT4 349 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF750Q32MQ0 723 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 RAB12Q6IQ22 244 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 GRHL2Q6ISB3 625 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 TMEM150AQ86TG1 271 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ACOT12Q8WYK0 555 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 SLC46A2Q9BY10 475 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 MFFQ9GZY8 342 aa13.88□□□□□ -0.19
SPIDR-201ENST00000297423 LYARQ9NX58 379 aaKnown RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 ZMAT5Q9UDW3 170 aaKnown RBP13.88□□□□□ -0.19
SPIDR-201ENST00000297423 A0A087WUU8 490 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 GAPDHSO14556 408 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-201ENST00000297423 OR1F1O43749 312 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 TAF13Q15543 124 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 MINDY4Q4G0A6 757 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 NANPQ8TBE9 248 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 BABAM2Q9NXR7 383 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 ERVK-19Q9WJR5 959 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 TFPIP10646 304 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF35P13682 527 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 MAGEB1P43366 347 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 OR12D2P58182 307 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 SLC7A9P82251 487 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 TNFRSF17Q02223 184 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 LILRA6Q6PI73 481 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
SPIDR-201ENST00000297423 LRIG1Q96JA1 1093 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms