RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HTR1AP08908 422 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 RNH1P13489 461 aaKnown RBP10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 PIGAP37287 484 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 LIPAP38571 399 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 RGRP47804 291 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 GCGRP47871 477 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 CD300CQ08708 224 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF169Q14929 603 aaPredicted RBP10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 CES4AQ5XG92 561 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 HMGN2P46Q86SG4 172 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 OR2T33Q8NG76 320 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 ST8SIA4Q92187 359 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 FUBP1Q96AE4 644 aaKnown RBP10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 RDH14Q9HBH5 336 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 PLSCR3Q9NRY6 295 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 TM7SF3Q9NS93 570 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 NLGN3Q9NZ94 848 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 AP1M2Q9Y6Q5 423 aa10.69□□□□□ -0.7
NPC1L1-201ENST00000289547 C17orf113A0A1B0GUU1 675 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PTHP01270 115 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 HRGP04196 525 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 FOLR3P41439 243 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 DCAF12Q5T6F0 453 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 HES5Q5TA89 166 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 LETMD1Q6P1Q0 360 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 C12orf40Q86WS4 652 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ACTL8Q9H568 366 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 RBBP6Q7Z6E9 1792 aaKnown RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 A0A1W2PPC4 97 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF670-ZNF695F2Z2N8 137 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 LATO43561 262 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SULT1B1O43704 296 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PIP5K1CO60331 668 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SNAPINO95295 136 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF823P16415 610 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 AHCYP23526 432 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ADH6P28332 368 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TBPL1P62380 186 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZXDBP98169 803 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SEMA3BQ13214 749 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF527Q8NB42 609 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 OR13H1Q8NG92 308 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 OR2L8Q8NGY9 312 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 RELTQ969Z4 430 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZFYVE21Q9BQ24 234 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ERVMER34-1Q9H9K5 563 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 KLK4Q9Y5K2 254 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SIPA1L1O43166 1804 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 E9PI62 339 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ARNTLO00327 626 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ANKRD28O15084 1053 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 RAB3AP20336 220 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 AK4P27144 223 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PRLHRP49683 370 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TUBB3Q13509 450 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ARHGAP19Q14CB8 494 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TBPL2Q6SJ96 375 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ENTHD1Q8IYW4 607 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 DNAJC22Q8N4W6 341 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 OR4K5Q8NGD3 323 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SNIP1Q8TAD8 396 aaKnown RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 DAZLQ92904 295 aaKnown RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 C3orf49Q96BT1 292 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 SLC6A7Q99884 636 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 GSX2Q9BZM3 304 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 FBXO8Q9NRD0 319 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PISDQ9UG56 409 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 RPH3AQ9Y2J0 694 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 A0A1B0GV50 99 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 METTL12A8MUP2 240 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PLRG1O43660 514 aaKnown RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 CPNE6O95741 557 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 C18orf21Q32NC0 220 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TMEM35AQ53FP2 167 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 LAIR1Q6GTX8 287 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TSSK4Q6SA08 328 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 TTLL10Q6ZVT0 673 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 MS4A15Q8N5U1 240 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PLA2G15Q8NCC3 412 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF419Q96HQ0 510 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 NECAB3Q96P71 396 aaPredicted RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 CHRDQ9H2X0 955 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PELI2Q9HAT8 420 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 CNOT2Q9NZN8 540 aaKnown RBP10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 PCDHA9Q9Y5H5 950 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 A3GALT2U3KPV4 340 aa10.68□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
NPC1L1-201ENST00000289547 ZNF878C9JN71 531 aa10.67□□□□□ -0.7
NPC1L1-201ENST00000289547 MT-ND4P03905 459 aa10.67□□□□□ -0.7
NPC1L1-201ENST00000289547 M6PRP20645 277 aa10.67□□□□□ -0.7
NPC1L1-201ENST00000289547 CERS1P27544 350 aa10.67□□□□□ -0.7
NPC1L1-201ENST00000289547 DLX5P56178 289 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms