RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PGGHGQ32M88 737 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 HEPHL1Q6MZM0 1159 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 FGD2Q7Z6J4 655 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 LRRTM4Q86VH4 590 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 GID4Q8IVV7 300 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 OR5D16Q8NGK9 328 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 OR2T4Q8NH00 348 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 RIT1Q92963 219 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 SGTBQ96EQ0 304 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 RAB11FIP5Q9BXF6 653 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 RBCK1Q9BYM8 510 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 AICDAQ9GZX7 198 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 SLC38A1Q9H2H9 487 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 MTG2Q9H4K7 406 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 CES1P1Q9UKY3 287 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ENTPD4Q9Y227 616 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 KCNMB2Q9Y691 235 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ACP5P13686 325 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ACSL1P33121 698 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 SOX18P35713 384 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 AHRP35869 848 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 NCBP2P52298 156 aaKnown RBP eCLIP9.67□□□□□ -0.86
SKA1-201ENST00000285116 TAS2R41P59536 307 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 COL9A2Q14055 689 aaPredicted RBP9.67□□□□□ -0.86
SKA1-201ENST00000285116 DHCR24Q15392 516 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 IDNKQ5T6J7 187 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 HBMQ6B0K9 141 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ZNF322Q6U7Q0 402 aaPredicted RBP9.67□□□□□ -0.86
SKA1-201ENST00000285116 ZNF620Q6ZNG0 422 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 MBOAT2Q6ZWT7 520 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 CHMP1BQ7LBR1 199 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 KRT74Q7RTS7 529 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 OAFQ86UD1 273 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 RAB42Q8N4Z0 105 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 BRIX1Q8TDN6 353 aaKnown RBP9.67□□□□□ -0.86
SKA1-201ENST00000285116 FBXW5Q969U6 566 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 LINC00052Q96N35 136 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ZNF275Q9NSD4 429 aaPredicted RBP9.67□□□□□ -0.86
SKA1-201ENST00000285116 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 SDHAF2Q9NX18 166 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 TRPC4Q9UBN4 977 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ACSL5Q9ULC5 683 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 HCFC2Q9Y5Z7 792 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 LOC105369274A0A096LPK9 316 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ANKRD61A6NGH8 418 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 EEF1E1O43324 174 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 EMC8O43402 210 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 RGS9O75916 674 aaPredicted RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 WDPCPO95876 746 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CELP19835 753 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CD79BP40259 229 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TPMTP51580 245 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PRR5P85299 388 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PRDX1Q06830 199 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 ELAVL3Q14576 367 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 FAM180BQ6P0A1 224 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TFAP2EQ6VUC0 442 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ZNF793Q6ZN11 406 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ETFBKMTQ8IXQ9 262 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR4N4Q8N0Y3 316 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 UXS1Q8NBZ7 420 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR52H1Q8NGJ2 320 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR6M1Q8NGM8 313 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OR4Q3Q8NH05 313 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 HSD17B8Q92506 261 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 AHCYL2Q96HN2 611 aaKnown RBP9.66□□□□□ -0.86
SKA1-201ENST00000285116 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 KCNK12Q9HB15 430 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PLAGL1Q9UM63 463 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 HEATR5BQ9P2D3 2071 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CUL9Q8IWT3 2517 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 C2orf92A0A1B0GVN3 265 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CD8B2A6NJW9 211 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 H3BUI4 141 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CXCL14O95715 111 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CD8BP10966 210 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ADH5P11766 374 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 UGT2B7P16662 529 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 LCN1P31025 176 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 SLC9A5Q14940 896 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 OVCH2Q7RTZ1 564 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 ADCK2Q7Z695 626 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 LHFPL3Q86UP9 236 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TPRA1Q86W33 373 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 GPR135Q8IZ08 494 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 TEX19Q8NA77 164 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PTP4A1Q93096 173 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 BBS4Q96RK4 519 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 SEMA4GQ9NTN9 838 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 NLGN3Q9NZ94 848 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 HCN3Q9P1Z3 774 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 C5AR2Q9P296 337 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 CHST2Q9Y4C5 530 aa9.66□□□□□ -0.86
SKA1-201ENST00000285116 PCYT1BQ9Y5K3 369 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms