RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CMPK2Q5EBM0 449 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 SHQ1Q6PI26 577 aaKnown RBP17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 DEF8Q6ZN54 512 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 HS3ST5Q8IZT8 346 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 FAM71CQ8NEG0 241 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 SECISBP2Q96T21 854 aaKnown RBP17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 RTN4RQ9BZR6 473 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 HPF1Q9NWY4 346 aa17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 CHCHD2Q9Y6H1 151 aaPredicted RBP17.32■□□□□ 0.36
PDLIM3-202ENST00000284770 J3KTA2 159 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 TPST2O60704 377 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 E2F6O75461 281 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 UBTFL6P0CB48 400 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 GKN3PP0CG01 181 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 UBL4AP11441 157 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 RRM2P31350 389 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 DNAJA1P31689 397 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 EIF2S3P41091 472 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF136P52737 540 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF468Q5VIY5 522 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 ABHD17BQ5VST6 288 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 STK32CQ86UX6 486 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 BEST3Q8N1M1 668 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 GATSQ8NAP1 163 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 PHF10Q8WUB8 498 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 PIP5K1AQ99755 562 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 REEP1Q9H902 201 aa17.31■□□□□ 0.36
PDLIM3-202ENST00000284770 GTPBP1O00178 669 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ADAM10O14672 748 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 FFAR1O14842 300 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ADAMDEC1O15204 470 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF264O43296 627 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ANGPTL1O95841 491 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 PRG2P13727 222 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 FPR1P21462 350 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 RPP38P78345 283 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 HOXC5Q00444 222 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 OTUD3Q5T2D3 398 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF550Q7Z398 422 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 RANBP3LQ86VV4 465 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 CYP4Z1Q86W10 505 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 HIPK1Q86Z02 1210 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SPACA3Q8IXA5 215 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 GPALPP1Q8IXQ4 340 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 NRBF2Q96F24 287 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SGCZQ96LD1 299 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 EPYCQ99645 322 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 BARD1Q99728 777 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SH2D2AQ9NP31 389 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 EXOSC3Q9NQT5 275 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ACAD8Q9UKU7 415 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SAMHD1Q9Y3Z3 626 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 TESMINQ9Y4I5 508 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 LYVE1Q9Y5Y7 322 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 AP3D1O14617 1153 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SCO2O43819 266 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ALPLP05186 524 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ACAA2P42765 397 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 HLCSP50747 726 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ALDH3A2P51648 485 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 PPP2R2BQ00005 443 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 SKP2Q13309 424 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 DAG1Q14118 895 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 DEFB109BQ30KR1 87 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 MISPQ8IVT2 679 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF440Q8IYI8 595 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 MCHR1Q99705 422 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 PRR14Q9BWN1 585 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 GABARAPL1Q9H0R8 117 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 ABI3Q9P2A4 366 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 A4GNTQ9UNA3 340 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 CARD8Q9Y2G2 431 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 EXPH5Q8NEV8 1989 aa17.3■□□□□ 0.36
PDLIM3-202ENST00000284770 A6NL46 340 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 RRP8O43159 456 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 FMO6PO60774 539 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CYP7B1O75881 506 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 UQCRBP14927 111 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 FUT4P22083 530 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CASP3P42574 277 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 HSPA13P48723 471 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CYB561P49447 251 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 GAS1P54826 345 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 SNTA1Q13424 505 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 PIN1Q13526 163 aaPredicted RBP17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 NDUFAF6Q330K2 333 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 AGAP7PQ5VUJ5 663 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CBLN3Q6UW01 205 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CCDC81Q6ZN84 652 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 OR4C15Q8NGM1 316 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 MAGEE2Q8TD90 523 aaPredicted RBP17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 PAQR8Q8TEZ7 354 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 SDCCAG3Q96C92 435 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 PRRC1Q96M27 445 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 AGAP4Q96P64 663 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 OSBPL10Q9BXB5 764 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 LAT2Q9GZY6 243 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms