RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TNK1Q13470 666 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TOMM34Q15785 309 aaPredicted RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 ZNF239Q16600 458 aaKnown RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 RFTN2Q52LD8 501 aaPredicted RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 GLE1Q53GS7 698 aaKnown RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 BEX5Q5H9J7 111 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 CBLN3Q6UW01 205 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TFAP2EQ6VUC0 442 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 PLEKHM3Q6ZWE6 761 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 GABRG1Q8N1C3 465 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 NUP43Q8NFH3 380 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 OR2V1Q8NHB1 315 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 FAM76AQ8TAV0 307 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 GPR151Q8TDV0 419 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 ACMSDQ8TDX5 336 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 RNF128Q8TEB7 428 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 ABHD3Q8WU67 409 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 ROBO4Q8WZ75 1007 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 S100PBPQ96BU1 408 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 ZNF764Q96H86 408 aaPredicted RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 SH3YL1Q96HL8 342 aaPredicted RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 TSSK3Q96PN8 268 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 BDH2Q9BUT1 245 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TBL1XR1Q9BZK7 514 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TSPYL1Q9H0U9 437 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 SDHAF3Q9NRP4 125 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 PSMC3IPQ9P2W1 217 aaPredicted RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 GIMAP2Q9UG22 337 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TBK1Q9UHD2 729 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 BAIAP2L1Q9UHR4 511 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 STK38LQ9Y2H1 464 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 KCNE3Q9Y6H6 103 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 TMEM233B4DJY2 109 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 ZNF814B7Z6K7 855 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 LSM1O15116 133 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 PDPK1O15530 556 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 AKAP10O43572 662 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 NDUFB5O43674 189 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 NDUFS7O75251 213 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 KCNH1O95259 989 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 MYL2P10916 166 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 FCGR2AP12318 317 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 PRKAG1P54619 331 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 DNAJB13P59910 316 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 RAC1P63000 192 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 ZNF117Q03924 483 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 DOC2BQ14184 412 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 FGFBP1Q14512 234 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 PCLAFQ15004 111 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 SGCBQ16585 318 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 IMPG1Q17R60 797 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 NDUFAF6Q330K2 333 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 UGT3A2Q3SY77 523 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 CPTPQ5TA50 214 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 PPP4R4Q6NUP7 873 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 DNM1P46Q6ZS02 220 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 TRMT10CQ7L0Y3 403 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 CXXC5Q7LFL8 322 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 ZNF611Q8N823 705 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 CDRT4Q8N9R6 151 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 ACTRT2Q8TDY3 377 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 AKAP1Q92667 903 aaKnown RBP eCLIP7.96□□□□□ -1.148e-7■■■■□ 24.6
TPM3-201ENST00000271850 FAM120BQ96EK7 910 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 DTNBP1Q96EV8 351 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 MS4A4EQ96PG1 132 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 C12orf49Q9H741 205 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 LRTM1Q9HBL6 345 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 OXSMQ9NWU1 459 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 WBP11Q9Y2W2 641 aaKnown RBP7.96□□□□□ -1.14
TPM3-201ENST00000271850 EMC9Q9Y3B6 208 aa7.96□□□□□ -1.14
TPM3-201ENST00000271850 CHD3Q12873 2000 aaKnown RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 A0A087WZY1 265 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 A0A096LNT2 108 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 IGHV3-15A0A0B4J1V0 119 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CENPVL1A0A0U1RR11 272 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 A0A1W2PQD3 144 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 NPIPB9F8W1W9 429 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 GLRA3O75311 464 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 SEC22BO75396 215 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CD8AP01732 235 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 CHRNGP07510 517 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 UROSP10746 265 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 PPP3CBP16298 524 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 SFTPDP35247 375 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 PSMD4P55036 377 aaKnown RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 RPL38P63173 70 aaKnown RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 ZNHIT3Q15649 155 aaPredicted RBP7.95□□□□□ -1.14
TPM3-201ENST00000271850 TAB1Q15750 504 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 PGGHGQ32M88 737 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 NCMAPQ5T1S8 102 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 KANK2Q63ZY3 851 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 HBMQ6B0K9 141 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ADAM5Q6NVV9 412 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 RNF165Q6ZSG1 346 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 ESPNLQ6ZVH7 1005 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 OLIG3Q7RTU3 272 aa7.95□□□□□ -1.14
TPM3-201ENST00000271850 TRABD2AQ86V40 505 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms