RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 DHRS7BQ6IAN0 325 aaPredicted RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 SLC9B2Q86UD5 537 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 COMTD1Q86VU5 262 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 C11orf65Q8NCR3 313 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 OR8J1Q8NGP2 316 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 OR1S2Q8NGQ3 325 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 THAP6Q8TBB0 222 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 SPRYD4Q8WW59 207 aaPredicted RBP8.19□□□□□ -1.1
VAPB-201ENST00000265619 IGSF8Q969P0 613 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TOX2Q96NM4 488 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 PFDN5Q99471 154 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 THSD1Q9NS62 852 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TRPS1Q9UHF7 1281 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 MYOFQ9NZM1 2061 aa8.19□□□□□ -1.1
VAPB-201ENST00000265619 TMEM82A0PJX8 343 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 H7C4K7 107 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 PRAMEF12O95522 483 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SERPINA3P01011 423 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 F5P12259 2224 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ZNF35P13682 527 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 IDSP22304 550 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ELAVL4P26378 380 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 ADH6P28332 368 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 RBMS1P29558 406 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 AKR1C3P42330 323 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SLC6A11P48066 632 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SMAD4Q13485 552 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 EIF4EBP2Q13542 120 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 SCARB2Q14108 478 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 BEX5Q5H9J7 111 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 RNLSQ5VYX0 342 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 KRT78Q8N1N4 520 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ING5Q8WYH8 240 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 CHFRQ96EP1 664 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 MARS2Q96GW9 593 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 VN1R3Q9BXE9 311 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 POLR2J3Q9H1A7 115 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 EGLN3Q9H6Z9 239 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 MAP4K5Q9Y4K4 846 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 AP1M2Q9Y6Q5 423 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 A0A1B0GTQ1 180 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ARHGEF7Q14155 803 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 OCLNQ16625 522 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 FBXL22Q6P050 247 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 PGBD2Q6P3X8 592 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 CNKSR3Q6P9H4 555 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 GLT6D1Q7Z4J2 308 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 BBS1Q8NFJ9 593 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 OR13C5Q8NGS8 318 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 LCORQ96JN0 433 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 SLC22A12Q96S37 553 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 CSNK1G1Q9HCP0 422 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 MRPL17Q9NRX2 175 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 FBXW2Q9UKT8 454 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ENPP4Q9Y6X5 453 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 A0A0D9SEW6 157 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ZNF729A6NN14 1252 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 PRR23D1E9PI22 279 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 PRAMEF2O60811 474 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SLC25A12O75746 678 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 IGLV3-25P01717 112 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 GBAP04062 536 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 S100A9P06702 114 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 PRR23D2P0DMB1 279 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 HOXB8P17481 243 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 GABRR2P28476 465 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ACTR1BP42025 376 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SLC1A3P43003 542 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 GABREP78334 506 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SMAD3P84022 425 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 FOXK2Q01167 660 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 RBM39Q14498 530 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 PRSS53Q2L4Q9 553 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 STPG1Q5TH74 334 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 SFXN4Q6P4A7 337 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 CFAP161Q6P656 301 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 CRTC1Q6UUV9 634 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 ELP5Q8TE02 316 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 C14orf144Q96I85 54 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 NAA11Q9BSU3 229 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 CIPCQ9C0C6 399 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
VAPB-201ENST00000265619 AFF4Q9UHB7 1163 aaKnown RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
VAPB-201ENST00000265619 KCNE1BA0A087WTH5 132 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 A0A1W2PRU2 124 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 TMEM129A0AVI4 362 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 ZC3H12DA2A288 527 aaKnown RBP8.17□□□□□ -1.1
VAPB-201ENST00000265619 COLCA2A8K830 154 aa8.17□□□□□ -1.1
VAPB-201ENST00000265619 UBE2CO00762 179 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms