RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 PRR23CQ6ZRP0 262 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 KIAA0907Q7Z7F0 614 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 IL17RCQ8NAC3 791 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 BCL2L10Q9HD36 194 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 MRPL15Q9P015 296 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 NCKAP1Q9Y2A7 1128 aa13.48□□□□□ -0.25
SFSWAP-201ENST00000261674 C1QTNF3-AMACRE9PGA6 284 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 EIF4EP06730 217 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 HCCSP53701 268 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 RNLSQ5VYX0 342 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 FAM111BQ6SJ93 734 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ETFBKMTQ8IXQ9 262 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 OR52E1Q8NGJ3 308 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 PFN4Q8NHR9 129 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 OR52D1Q9H346 318 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SYNPO2LQ9H987 977 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 PRDM7Q9NQW5 492 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 FBXL4Q9UKA2 621 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ASB4Q9Y574 426 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SEC16AO15027 2179 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A1W2PP55 124 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ZSCAN5BA6NJL1 495 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 KDM4EB2RXH2 506 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC31A1O15431 190 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 TOXO94900 526 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 PYCR1P32322 319 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 E2F1Q01094 437 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 RPA4Q13156 261 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 NTRK2Q16620 822 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 DEFB134Q4QY38 66 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 RFPL4BQ6ZWI9 263 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 IZUMO1Q8IYV9 350 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 GPR135Q8IZ08 494 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SHISA5Q8N114 240 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 DEFB119Q8N690 84 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 LRRC17Q8N6Y2 441 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 OR52L1Q8NGH7 329 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 GRHL3Q8TE85 626 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 RFT1Q96AA3 541 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 BABAM2Q9NXR7 383 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 COQ3Q9NZJ6 369 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 USP36Q9P275 1121 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SERGEFQ9UGK8 458 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC23A1Q9UHI7 598 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 RNF13O43567 381 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 NOS1APO75052 506 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ZIC2O95409 532 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 THY1P04216 161 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 CLDN20P56880 219 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SNRPNP63162 240 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 PUS10Q3MIT2 529 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC25A30Q5SVS4 291 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SDE2Q6IQ49 451 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF620Q6ZNG0 422 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 OR8H3Q8N146 312 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 GALNT6Q8NCL4 622 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 KIAA1143Q96AT1 154 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 GON7Q9BXV9 100 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 CDCP1Q9H5V8 836 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 C20orf141Q9NUB4 165 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 LIPT1Q9Y234 373 aa13.47□□□□□ -0.25
SFSWAP-201ENST00000261674 LRRK1Q38SD2 2015 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 PLXNA2O75051 1894 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 TPD52L2O43399 206 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 PROM1O43490 865 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 C1QBP02746 253 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 DRD5P21918 477 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 TEAD1P28347 426 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 FIGNL1Q6PIW4 674 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 Q6ZS52 159 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 ARIH2OSQ8N7S6 290 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 POGLUT1Q8NBL1 392 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 OR7G2Q8NG99 324 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 WFIKKN2Q8TEU8 576 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 PIGKQ92643 395 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 FGF11Q92914 225 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 OTUB2Q96DC9 234 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 PRO3102Q9H379 93 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
SFSWAP-201ENST00000261674 TRAV27A0A087WT01 109 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 A0A0A6YYJ9 748 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 HTR1FP30939 366 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 HSD17B2P37059 387 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 ATP12AP54707 1039 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 EOGTQ5NDL2 527 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF765Q7L2R6 523 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 HDDC3Q8N4P3 179 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 OR2L5Q8NG80 312 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 OR5W2Q8NH69 310 aa13.46□□□□□ -0.26
SFSWAP-201ENST00000261674 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms