RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MLLT3P42568 568 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 EVX1P49640 407 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CCR6P51684 374 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HCCSP53701 268 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CLDN12P56749 244 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 VSX2P58304 361 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 ERVK-21P61565 698 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TSPAN5P62079 268 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GPLD1P80108 840 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TPBGQ13641 420 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CRMP1Q14194 572 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MRPL2Q5T653 305 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 METRNLQ641Q3 311 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF770Q6IQ21 691 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF322Q6U7Q0 402 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 PRSS45Q7RTY3 260 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 UBE2Q1Q7Z7E8 422 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 KIF18BQ86Y91 864 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PRSS58Q8IYP2 241 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 METTL27Q8N6F8 245 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 LINC01555Q8NAE3 123 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PFN4Q8NHR9 129 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 BPIFA2Q96DR5 249 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CCDC120Q96HB5 630 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PTCHD1Q96NR3 888 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 NXF2Q9GZY0 626 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC6A17Q9H1V8 727 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CDCP1Q9H5V8 836 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TCF7L1Q9HCS4 588 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SIDT1Q9NXL6 827 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 RDH8Q9NYR8 311 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF69Q9UC07 566 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PHF11Q9UIL8 331 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 KCND3Q9UK17 655 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF443Q9Y2A4 671 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 CACNG2Q9Y698 323 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 STON1Q9Y6Q2 735 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 LAMA3Q16787 3333 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SCN4AP35499 1836 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SCN3AQ9NY46 2000 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR6C74A6NCV1 312 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ARRDC5A6NEK1 342 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC9B1P1A6NJY1 282 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LRRN3E7EW58 273 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PEX12O00623 359 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PLA2G10O15496 165 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CRYZL1O95825 349 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 H2AFB2P0C5Z0 115 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 CLUP10909 449 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ATF4P18848 351 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 EVI2BP34910 448 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 EFR3AQ14156 821 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GPR176Q14439 515 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ALG10BQ5I7T1 473 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SFXN4Q6P4A7 337 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LYPD4Q6UWN0 246 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 COMTD1Q86VU5 262 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GPR135Q8IZ08 494 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SAMD14Q8IZD0 417 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 TP53I13Q8NBR0 393 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 OR2L3Q8NG85 312 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR2A1Q8NGT9 310 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR4Q3Q8NH05 313 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TNFAIP8L1Q8WVP5 186 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SMPDL3BQ92485 455 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GHSRQ92847 366 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 RAB7BQ96AH8 199 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MOAP1Q96BY2 351 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ORAI1Q96D31 301 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MS4A6EQ96DS6 147 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MS4A4EQ96PG1 132 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 KXD1Q9BQD3 176 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ZNF559Q9BR84 538 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ARHGAP9Q9BRR9 750 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TAPBPLQ9BX59 468 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GPR174Q9BXC1 333 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GON7Q9BXV9 100 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 SLC38A1Q9H2H9 487 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR51J1Q9H342 316 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 LRRN3Q9H3W5 708 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 TRAPPC4Q9Y296 219 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 PCDHGB7Q9Y5F8 929 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 MN1Q10571 1320 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 UBE2QL1A1L167 161 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 DVL2O14641 736 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 FMO6PO60774 539 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 FZD7O75084 574 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ALX3O95076 343 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR6A2O95222 327 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 AGR2O95994 175 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 C4BPBP20851 252 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OMPP47874 163 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 GZMKP49863 264 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 POU6F2P78424 691 aaPredicted RBP4.42□□□□□ -1.7
USP44-201ENST00000258499 PITPNAQ00169 270 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 ILF3Q12906 894 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP44-201ENST00000258499 AGERQ15109 404 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 OR1Q1Q15612 314 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 BCL2A1Q16548 175 aa4.42□□□□□ -1.7
USP44-201ENST00000258499 DUSP5Q16690 384 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms