RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 GKN3PP0CG01 181 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 RPA2P15927 270 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MGMTP16455 207 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PAMP19021 973 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 S100A2P29034 98 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SMSP52788 366 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MTPNP58546 118 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 CDC42P60953 191 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 UFM1P61960 85 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF177Q13360 481 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 ZNHIT3Q15649 155 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 DPYSL2Q16555 572 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SYPL2Q5VXT5 272 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 UBE2FQ969M7 185 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 TADA1Q96BN2 335 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 FAM120BQ96EK7 910 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PPM1MQ96MI6 270 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MTERF1Q99551 399 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MAPKAP1Q9BPZ7 522 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 LRFN3Q9BTN0 628 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GAL3ST2Q9H3Q3 398 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MS4A12Q9NXJ0 267 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 RPS6KB2Q9UBS0 482 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SH3BGRL2Q9UJC5 107 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 WASF3Q9UPY6 502 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GOLT1BQ9Y3E0 138 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PCDHGC4Q9Y5F7 938 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PCDHGA5Q9Y5G8 931 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PCDHGA1Q9Y5H4 931 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 KIAA1549LQ6ZVL6 1849 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 C2CD4BA6NLJ0 364 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GFRA2O00451 464 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 HCRTR2O43614 444 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SIX6O95475 246 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 NR2C1P13056 603 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PTPN3P26045 913 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MST1P26927 711 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SRSF11Q05519 484 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GTF2H3Q13889 308 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MINDY4Q4G0A6 757 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 TMEM255AQ5JRV8 349 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 NKAPLQ5M9Q1 402 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 DEF8Q6ZN54 512 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 MBOAT1Q6ZNC8 495 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GNPDA2Q8TDQ7 276 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 S100PBPQ96BU1 408 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 OTUB2Q96DC9 234 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF385AQ96PM9 386 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 ADAM19Q9H013 955 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PIF1Q9H611 641 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 TBC1D17Q9HA65 648 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 C1GALT1Q9NS00 363 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 CYSLTR2Q9NS75 346 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 TEX10Q9NXF1 929 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 VAPAQ9P0L0 249 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SLAMF8Q9P0V8 285 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 PIPOXQ9P0Z9 390 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 EIF2B4Q9UI10 523 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 LSM7Q9UK45 103 aaKnown RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 LOC105369274A0A096LPK9 316 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 GNG14A0A1W2PPG7 69 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 A0A1W2PRB8 838 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 TMEM72A0PK05 275 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 WNT9AO14904 365 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 GRAP2O75791 330 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 AKR7A3O95154 331 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 NFATC1O95644 943 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 AK1P00568 194 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 ESR1P03372 595 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 KLKB1P03952 638 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 CD2P06729 351 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 HOXB5P09067 269 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 HOXA5P20719 270 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 GALP22466 123 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 EPHA2P29317 976 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 AKT1P31749 480 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 CTHP32929 405 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 NOS2P35228 1153 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 SELENOPP49908 381 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 DIO3P55073 304 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 SH3BP2P78314 561 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 IL10RBQ08334 325 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 SGCGQ13326 291 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 INPP5JQ15735 1006 aaPredicted RBP11.05□□□□□ -0.64
CCNA1-201ENST00000255465 TTLL9Q3SXZ7 439 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 ZRANB3Q5FWF4 1079 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 TMEM201Q5SNT2 666 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 H3F3CQ6NXT2 135 aa11.05□□□□□ -0.64
CCNA1-201ENST00000255465 SLC30A6Q6NXT4 461 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms