RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CDRT1O95170 752 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 LYPD3O95274 346 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 LALBAP00709 142 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 SPANXN2Q5MJ10 180 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 OR4N2Q8NGD1 307 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 CTHRC1Q96CG8 243 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 SDHCQ99643 169 aaPredicted RBP17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 C14orf119Q9NWQ9 140 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 ERVK13-1Q9NX77 482 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 NLGN3Q9NZ94 848 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 KLHL3Q9UH77 587 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 SATB2Q9UPW6 733 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 TMEM129A0AVI4 362 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ZC3H12DA2A288 527 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC9B1P1A6NJY1 282 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 OR5K4A6NMS3 321 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 TGFBR3LH3BV60 316 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 TNFSF8P32971 234 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 MAP3K8P41279 467 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 RAB38P57729 211 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ARMC6Q6NXE6 501 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 GDPGP1Q6ZNW5 385 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 LAPTM4BQ86VI4 370 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ARHGEF39Q8N4T4 335 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ZNF614Q8N883 585 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SYT14Q8NB59 555 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 OR2T33Q8NG76 320 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 GRHL3Q8TE85 626 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 STACQ99469 402 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 PRRG3Q9BZD7 231 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 UBQLN3Q9H347 655 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SEMA6CQ9H3T2 930 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 HINT3Q9NQE9 182 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ZNF223Q9UK11 482 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SNTNA6NMZ2 147 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 OR10H2O60403 315 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 CSF2P04141 144 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 POU6F2P78424 691 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 MAT1AQ00266 395 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 ERV3-1Q14264 604 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC35F1Q5T1Q4 408 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 SMARCD3Q6STE5 483 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 CPOQ8IVL8 374 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 LAX1Q8IWV1 398 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 VWA5B2Q8N398 1253 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 TMEM239Q8WW34 195 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 CEP19Q96LK0 163 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 OR52D1Q9H346 318 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 MED20Q9H944 212 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 CBLCQ9ULV8 474 aa17.32■□□□□ 0.36
PDLIM4-201ENST00000253754 A0A075B6Q4 140 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 UNC119BA6NIH7 251 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 BRINP1O60477 761 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 MSL3P1P0C860 447 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 IFI30P13284 250 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC1A3P43003 542 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 CSNK1EP49674 416 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 RORCP51449 518 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 ZNF791Q3KP31 576 aaPredicted RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 MANEAQ5SRI9 462 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 AGAP7PQ5VUJ5 663 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 C19orf47Q8N9M1 422 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 FANK1Q8TC84 345 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 C1GALT1C1Q96EU7 318 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 DCLRE1CQ96SD1 692 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 DTX4Q9Y2E6 619 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 TECTAO75443 2155 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 ADAM11O75078 769 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 KCNK2O95069 426 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 ETV6P41212 452 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 BNC1Q01954 994 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 ZMAT1Q5H9K5 638 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 PDZK1Q5T2W1 519 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 MCATQ8IVS2 390 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 PSD4Q8NDX1 1056 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 C1orf216Q8TAB5 229 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 CNOT9Q92600 299 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 NACC2Q96BF6 587 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC30A2Q9BRI3 323 aa17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 SIDT1Q9NXL6 827 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 EXOSC1Q9Y3B2 195 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 SF3B6Q9Y3B4 125 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-201ENST00000253754 ISPDA4D126 451 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 DLGAP3O95886 979 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 IGKV1D-16P01601 117 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 NME1P15531 152 aaKnown RBP17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 SSTR4P31391 388 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ZXDAP98168 799 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 HNRNPA0Q13151 305 aaKnown RBP17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 PLBD1Q6P4A8 553 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 METTL27Q8N6F8 245 aaPredicted RBP17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 SIRT6Q8N6T7 355 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ZNF485Q8NCK3 441 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 OR13C2Q8NGS9 318 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 LMX1AQ8TE12 382 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ASB15Q8WXK1 588 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 PEX11GQ96HA9 241 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 PTCHD1Q96NR3 888 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 CRNNQ9UBG3 495 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms