RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 GPR89BP0CG08 455 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 PRKAG1P54619 331 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 DUSP2Q05923 314 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 OR2L8Q8NGY9 312 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 OR4Q3Q8NH05 313 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 GNPDA2Q8TDQ7 276 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 YIPF4Q9BSR8 244 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 SCML1Q9UN30 329 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 SIRT4Q9Y6E7 314 aaPredicted RBP17.63■□□□□ 0.41
SNX4-201ENST00000251775 FAM170BA6NMN3 283 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SOX30O94993 753 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 CEACAM5P06731 702 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 HOXD4P09016 255 aaPredicted RBP17.62■□□□□ 0.41
SNX4-201ENST00000251775 NPR2P20594 1047 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 C5AR1P21730 350 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 DNASE1P24855 282 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ACSL1P33121 698 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ST3GAL2Q16842 350 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SLC30A6Q6NXT4 461 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 OR52E1Q8NGJ3 308 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 NXPE2Q96DL1 559 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 MS4A6EQ96DS6 147 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SYNPO2LQ9H987 977 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 LIN7BQ9HAP6 207 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 DLL4Q9NR61 685 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 RASD1Q9Y272 281 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 A0A1B0GVI7 797 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 A0A1W2PR48 441 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 A0A1W2PS29 197 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SURF4O15260 269 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ERAL1O75616 437 aaKnown RBP17.62■□□□□ 0.41
SNX4-201ENST00000251775 SULT1A3P0DMM9 295 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SULT1A4P0DMN0 295 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SDHBP21912 280 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 GIFP27352 417 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 SHC1P29353 583 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 FUT5Q11128 374 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 TSPAN31Q12999 210 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ENPP2Q13822 863 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 RASSF6Q6ZTQ3 369 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 FAM46AQ96IP4 442 aaKnown RBP17.62■□□□□ 0.41
SNX4-201ENST00000251775 KCNN2Q9H2S1 579 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 MRPS30Q9NP92 439 aaKnown RBP17.62■□□□□ 0.41
SNX4-201ENST00000251775 PRDM7Q9NQW5 492 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ATG4BQ9Y4P1 393 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 FKBP7Q9Y680 259 aa17.62■□□□□ 0.41
SNX4-201ENST00000251775 ERI3O43414 337 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 PRICKLE3O43900 615 aaPredicted RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 GNSP15586 552 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 TEAD1P28347 426 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 OR10A3P58181 314 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 KRT33BQ14525 404 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 SLC9A5Q14940 896 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 GSG1Q2KHT4 349 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 TMEM35AQ53FP2 167 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 KIAA1324Q6UXG2 1013 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 TOR1AIP2Q8NFQ8 470 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 BEST4Q8NFU0 473 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 SUN3Q8TAQ9 357 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 KCTD12Q96CX2 325 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 BBS4Q96RK4 519 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 TIMM29Q9BSF4 260 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 FAIM2Q9BWQ8 316 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 GSAPA4D1B5 854 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 CASC3O15234 703 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 CHRM4P08173 479 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 BUD31P41223 144 aaPredicted RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 CRYZQ08257 329 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 PYHIN1Q6K0P9 492 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 FAM122CQ6P4D5 195 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 PIAS4Q8N2W9 510 aaPredicted RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 MS4A15Q8N5U1 240 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 SIRT6Q8N6T7 355 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 ACOT4Q8N9L9 421 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 TTLQ8NG68 377 aa17.61■□□□□ 0.41
SNX4-201ENST00000251775 RBPMSQ93062 196 aaKnown RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 CNRIP1Q96F85 164 aaPredicted RBP17.61■□□□□ 0.41
SNX4-201ENST00000251775 PRR19A6NJB7 356 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 G3V3Q6 166 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 TSPAN4O14817 238 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 ADH1BP00325 375 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 HIST1H1TP22492 207 aaPredicted RBP17.6■□□□□ 0.41
SNX4-201ENST00000251775 PEBP1P30086 187 aaKnown RBP17.6■□□□□ 0.41
SNX4-201ENST00000251775 NTSP30990 170 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 CCR6P51684 374 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 VSX2P58304 361 aaPredicted RBP17.6■□□□□ 0.41
SNX4-201ENST00000251775 LASP1Q14847 261 aaKnown RBP17.6■□□□□ 0.41
SNX4-201ENST00000251775 FAM27D1Q5T7N8 215 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 ABHD17CQ6PCB6 329 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 SIAH3Q8IW03 269 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 CCDC116Q8IYX3 515 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 ADAMTS14Q8WXS8 1223 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 WBP1Q96G27 269 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 TOE1Q96GM8 510 aaKnown RBP17.6■□□□□ 0.41
SNX4-201ENST00000251775 C1QTNF2Q9BXJ5 285 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 CACNG6Q9BXT2 260 aa17.6■□□□□ 0.41
SNX4-201ENST00000251775 SPHK1Q9NYA1 384 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms