RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 REM1O75628 298 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 STK17BO94768 372 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 UTS2O95399 124 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 THY1P04216 161 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 PRG2P13727 222 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 POU2F1P14859 743 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 ITIH1P19827 911 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 CHMP24386 653 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 FPR3P25089 353 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 ABCD3P28288 659 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 EPHA2P29317 976 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 ETV5P41161 510 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 RPL5P46777 297 aaKnown RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 GSSP48637 474 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 CDC42P60953 191 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 HOXC5Q00444 222 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 CDK5R2Q13319 367 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 EFR3AQ14156 821 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 GALNT6Q8NCL4 622 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 OMA1Q96E52 524 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 PRSS27Q9BQR3 290 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 POLR1BQ9H9Y6 1135 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
SDF2-201ENST00000247020 SLC7A7Q9UM01 511 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 PLD2O14939 933 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 KLF7O75840 302 aaPredicted RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 DKK1O94907 266 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 LYPD3O95274 346 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 UBL4AP11441 157 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 TGM1P22735 817 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 CRHBPP24387 322 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 ELK4P28324 431 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 OMPP47874 163 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 NR1H2P55055 460 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 TRIP6Q15654 476 aaKnown RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 EXT1Q16394 746 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 MEP1AQ16819 746 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 CTU2Q2VPK5 515 aaKnown RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 TMEM164Q5U3C3 297 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 NKAIN4Q8IVV8 208 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 DNAJA4Q8WW22 397 aaPredicted RBP13.05□□□□□ -0.32
SDF2-201ENST00000247020 PMEPA1Q969W9 287 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 LMF1Q96S06 567 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 PRR14Q9BWN1 585 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 SPRY4Q9C004 299 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 NDUFA13Q9P0J0 144 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 PADI1Q9ULC6 663 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
SDF2-201ENST00000247020 GPR179Q6PRD1 2367 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 IGHV3-20A0A0C4DH32 117 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 HTR3EA5X5Y0 456 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 DPPA5A6NC42 116 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 SLC1A7O00341 560 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 ZNF264O43296 627 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 KLF4O43474 513 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
SDF2-201ENST00000247020 MRPS14O60783 128 aaKnown RBP13.04□□□□□ -0.32
SDF2-201ENST00000247020 ZFAND5O76080 213 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 FOLR3P41439 243 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 STAT5AP42229 794 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 SLC6A8P48029 635 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 PCOLCEQ15113 449 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 SLX4IPQ5VYV7 408 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
SDF2-201ENST00000247020 ULK3Q6PHR2 472 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 ENTHD1Q8IYW4 607 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 CLDN22Q8N7P3 220 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 TMEM239Q8WW34 195 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 NACC2Q96BF6 587 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 ADOQ96SZ5 270 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 ZNF426Q9BUY5 554 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 FAM192AQ9GZU8 254 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 RPS6KB2Q9UBS0 482 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 PISDQ9UG56 409 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 NTNG1Q9Y2I2 539 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 PTRH2Q9Y3E5 179 aaKnown RBP13.04□□□□□ -0.32
SDF2-201ENST00000247020 DMDP11532 3685 aa13.04□□□□□ -0.32
SDF2-201ENST00000247020 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TRBV11-1A0A0K0K1C0 115 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 A0A1B0GWA3 101 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 ICOSLGO75144 302 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 BCAS1O75363 584 aaPredicted RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 PPM1BO75688 479 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 OR6B1O95007 311 aa13.03□□□□□ -0.32
SDF2-201ENST00000247020 TP53P04637 393 aaPredicted RBP13.03□□□□□ -0.32
SDF2-201ENST00000247020 TFAP2AP05549 437 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms