RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 SLC22A10Q63ZE4 541 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 PLEKHM3Q6ZWE6 761 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 TSEN54Q7Z6J9 526 aaKnown RBP17.57■□□□□ 0.4
SBDS-201ENST00000246868 ICA1LQ8NDH6 482 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 FAM71CQ8NEG0 241 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 PRRC1Q96M27 445 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 UTP23Q9BRU9 249 aaKnown RBP17.57■□□□□ 0.4
SBDS-201ENST00000246868 FNDC11Q9BVV2 318 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 POLR2J2Q9GZM3 115 aaKnown RBP17.57■□□□□ 0.4
SBDS-201ENST00000246868 LAT2Q9GZY6 243 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 POLR2J3Q9H1A7 115 aaKnown RBP17.57■□□□□ 0.4
SBDS-201ENST00000246868 CNIH4Q9P003 139 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 CARD8Q9Y2G2 431 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 TESMINQ9Y4I5 508 aa17.57■□□□□ 0.4
SBDS-201ENST00000246868 CHCHD2Q9Y6H1 151 aaPredicted RBP17.57■□□□□ 0.4
SBDS-201ENST00000246868 J3KTA2 159 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 BCAS1O75363 584 aaPredicted RBP17.56■□□□□ 0.4
SBDS-201ENST00000246868 CASP3P42574 277 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 SLC6A8P48029 635 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 ST13P50502 369 aaKnown RBP17.56■□□□□ 0.4
SBDS-201ENST00000246868 CCL11P51671 97 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 CCR4P51679 360 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 ARHGDIAP52565 204 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 ZNF136P52737 540 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 COPZ1P61923 177 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 HOXC5Q00444 222 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 SKP2Q13309 424 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 GANABQ14697 944 aaKnown RBP17.56■□□□□ 0.4
SBDS-201ENST00000246868 TMEM81Q6P7N7 255 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 PAQR8Q8TEZ7 354 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 RNF138Q8WVD3 245 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 EME1Q96AY2 570 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 SDCCAG3Q96C92 435 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 DCBLD2Q96PD2 775 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 OSBPL11Q9BXB4 747 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 SSUH2Q9Y2M2 353 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 SAMHD1Q9Y3Z3 626 aaKnown RBP17.56■□□□□ 0.4
SBDS-201ENST00000246868 CACNA1AO00555 2505 aa17.56■□□□□ 0.4
SBDS-201ENST00000246868 URB1O60287 2271 aaKnown RBP17.56■□□□□ 0.4
SBDS-201ENST00000246868 CPSF4LA6NMK7 179 aaKnown RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 PRSS23O95084 383 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 LINGO3P0C6S8 592 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 ZNF23P17027 643 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 PLAURQ03405 335 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 PIN1Q13526 163 aaPredicted RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 RAPSNQ13702 412 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 NDUFAF6Q330K2 333 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 ENTPD8Q5MY95 495 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 ZNF468Q5VIY5 522 aaPredicted RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 SLC30A6Q6NXT4 461 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 LINC00696Q6ZRV3 163 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 DUSP19Q8WTR2 217 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 PHF10Q8WUB8 498 aaKnown RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 SH3YL1Q96HL8 342 aaPredicted RBP17.55■□□□□ 0.4
SBDS-201ENST00000246868 TRIM2Q9C040 744 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 VCX3BQ9H321 246 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 TMEM27Q9HBJ8 222 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 ANKRD10Q9NXR5 420 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 ACAD8Q9UKU7 415 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 WIF1Q9Y5W5 379 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 CPAMD8Q8IZJ3 1885 aa17.55■□□□□ 0.4
SBDS-201ENST00000246868 CASQ2O14958 399 aaPredicted RBP17.54■□□□□ 0.4
SBDS-201ENST00000246868 GADD45GO95257 159 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 P04436 131 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 H1F0P07305 194 aaKnown RBP17.54■□□□□ 0.4
SBDS-201ENST00000246868 PRG2P13727 222 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 DNAJA1P31689 397 aaKnown RBP17.54■□□□□ 0.4
SBDS-201ENST00000246868 RYKP34925 604 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 CDH12P55289 794 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 ZNF117Q03924 483 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 EPS8Q12929 822 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 GK3PQ14409 553 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 COLEC12Q5KU26 742 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 ZDHHC13Q8IUH4 622 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 TOR1AIP2Q8NFQ8 470 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 ADAMTS16Q8TE57 1224 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 EPYCQ99645 322 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 RTN4RQ9BZR6 473 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 NMNAT1Q9HAN9 279 aaPredicted RBP17.54■□□□□ 0.4
SBDS-201ENST00000246868 NTN4Q9HB63 628 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 GALNT9Q9HCQ5 603 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 PPP4R1LQ9P1A2 415 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 LRFN1Q9P244 771 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 A4GNTQ9UNA3 340 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 KCNMB2Q9Y691 235 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 U3KQV3 271 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 TNFRSF11BO00300 401 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 TPST2O60704 377 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 OR5F1O95221 314 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 ITPKBP27987 946 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 PTDSS1P48651 473 aaKnown RBP17.54■□□□□ 0.4
SBDS-201ENST00000246868 ST3GAL3Q11203 375 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 BICRALQ6AI39 1079 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 ZNF605Q86T29 641 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 OFCC1Q8IZS5 231 aa17.54■□□□□ 0.4
SBDS-201ENST00000246868 SVOPLQ8N434 492 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms