RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CNIH3Q8TBE1 160 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TMEM255BQ8WV15 326 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TP53INP1Q96A56 240 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TAAR9Q96RI9 348 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 C19orf25Q9UFG5 118 aaPredicted RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 PCNX2A6NKB5 2137 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 LOC102723996A0A087X1L8 192 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 A0A1W2PNU3 283 aaPredicted RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TRIM64CA6NLI5 447 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ZAR1LA6NP61 321 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 CRHBPP24387 322 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 IFNGR2P38484 337 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 OMPP47874 163 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 SLC26A5P58743 744 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 PLCXD2Q0VAA5 305 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 MAD2L1BPQ15013 274 aaPredicted RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 CD226Q15762 336 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 WDR88Q6ZMY6 472 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 MBOAT2Q6ZWT7 520 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 RRM2BQ7LG56 351 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ENTHD1Q8IYW4 607 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 SLC34A3Q8N130 599 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF527Q8NB42 609 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 FAM71CQ8NEG0 241 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 OMA1Q96E52 524 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 VMP1Q96GC9 406 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ZPBPQ9BS86 351 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 DDA1Q9BW61 102 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 LIN28AQ9H9Z2 209 aaKnown RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TMEM27Q9HBJ8 222 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 AASSQ9UDR5 926 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 PISDQ9UG56 409 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 SLC35A3Q9Y2D2 325 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 SCDO00767 359 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 ICOSLGO75144 302 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 SOX14O95416 240 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 IGFBP1P08833 259 aaPredicted RBP13.98□□□□□ -0.17
HDHD3-201ENST00000238379 JMJD7P0C870 316 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 HPGDP15428 266 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 KRT20P35900 424 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 GSSP48637 474 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 PNLIPRP2P54317 469 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 TUBA4AP68366 448 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 PSPHP78330 225 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 TRIP6Q15654 476 aaKnown RBP13.98□□□□□ -0.17
HDHD3-201ENST00000238379 TMEM236Q5W0B7 351 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 DHRS13Q6UX07 377 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 OR2Y1Q8NGV0 311 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 NUBPLQ8TB37 319 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 PIGXQ8TBF5 258 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 GNPDA2Q8TDQ7 276 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 SPRY4Q9C004 299 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 TRIM2Q9C040 744 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 ADNPQ9H2P0 1102 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 RNF6Q9Y252 685 aa13.98□□□□□ -0.17
HDHD3-201ENST00000238379 PTRH2Q9Y3E5 179 aaKnown RBP13.98□□□□□ -0.17
HDHD3-201ENST00000238379 A0A087WXM4 84 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 A0A0B4J2E0 115 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 TRBV11-1A0A0K0K1C0 115 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 A0A1B0GWA3 101 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 A0A1B0GX12 115 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 TMEM200CA6NKL6 621 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 SLC1A7O00341 560 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 KLF4O43474 513 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 IL12BP29460 328 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 RPL5P46777 297 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 HLCSP50747 726 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 ALDH6A1Q02252 535 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 C16orf47Q6ZP98 133 aaPredicted RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 GLRX5Q86SX6 157 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 MEX3DQ86XN8 651 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 NRMQ8IXM6 262 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 OR8K3Q8NH51 312 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 FAM81AQ8TBF8 368 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 APH1BQ8WW43 257 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF566Q969W8 418 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PRRX2Q99811 253 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 LRFN3Q9BTN0 628 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 RASSF1Q9NS23 344 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 TUBA8Q9NY65 449 aaPredicted RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PCDHGA3Q9Y5H0 932 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 CCDC187A0A096LP49 1063 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PLD2O14939 933 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 OIP5O43482 229 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PIP5K1CO60331 668 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 WBP4O75554 376 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 ANGPTL1O95841 491 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 DLGAP3O95886 979 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 NGFRP08138 427 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 CCDC159P0C7I6 412 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 GSTM3P21266 225 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 POU1F1P28069 291 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 IDH2P48735 452 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 CXCR4P61073 352 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 TSPAN31Q12999 210 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 TOP3AQ13472 1001 aaPredicted RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PCOLCEQ15113 449 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 STPG1Q5TH74 334 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms