RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF8P17098 575 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 EPHA2P29317 976 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SYT5O00445 386 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 NME2P22392 152 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SPCS3P61009 180 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 BEX3Q00994 111 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 XKR7Q5GH72 579 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SOHLH1Q5JUK2 328 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 RNF180Q86T96 592 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 MALSU1Q96EH3 234 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF275Q9NSD4 429 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SLC22A14Q9Y267 594 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 TRAV18A0A075B6X5 111 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 UPK1AO00322 258 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 P2RX6O15547 441 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 EIF4EP06730 217 aaKnown RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SULT1A3P0DMM9 295 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SULT1A4P0DMN0 295 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 GABRA1P14867 456 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 LMO2P25791 158 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SERPINA4P29622 427 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SPAM1P38567 509 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 MAPK8P45983 427 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 TP53INP2Q8IXH6 220 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 TAS2R5Q9NYW4 299 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SIX4Q9UIU6 781 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 CA14Q9ULX7 337 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 NDUFA2O43678 99 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 EDIL3O43854 480 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SUSD5O60279 629 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 STBD1O95210 358 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 FRKP42685 505 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ARSDP51689 593 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 PTPRCAPQ14761 206 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ZNHIT3Q15649 155 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 RPE65Q16518 533 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 ODF4Q2M2E3 257 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 PPP1R16AQ96I34 528 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 EGLN2Q96KS0 407 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 INPP5EQ9NRR6 644 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 KLF15Q9UIH9 416 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 FZD1Q9UP38 647 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 SEC14L6B5MCN3 397 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 KCNK5O95279 499 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 AHSA1O95433 338 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 EGFP01133 1207 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 LAMP1P11279 417 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 NDUFV2P19404 249 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 IL13RA1P78552 427 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF763Q0D2J5 394 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 SSX1Q16384 188 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GPR150Q8NGU9 434 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 SMPDL3AQ92484 453 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 RAB7BQ96AH8 199 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TTTY10Q9BZA0 68 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 J3KTA2 159 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 CXCL3P19876 107 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 EDNRBP24530 442 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 CD80P33681 288 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 IGFALSP35858 605 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GNALP38405 381 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 SLC10A6Q3KNW5 377 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 HENMT1Q5T8I9 393 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZDHHC20Q5W0Z9 365 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 HRASLSQ9HDD0 168 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 MMP26Q9NRE1 261 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 NPFFR2Q9Y5X5 522 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TARM1B6A8C7 271 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GJB1P08034 283 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 NMBP08949 121 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 FOXO1Q12778 655 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms