RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 BTBD2Q9BX70 525 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 NUP50Q9UKX7 468 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 SCN4AP35499 1836 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 GXYLT2A0PJZ3 443 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 SLC43A1O75387 559 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 RASAL1O95294 804 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 S100A6P06703 90 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ZDHHC11BP0C7U3 371 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 THBS2P35442 1172 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ID4P47928 161 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 PROKR1Q8TCW9 393 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 FBXO4Q9UKT5 387 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 MMACHCQ9Y4U1 282 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 COL4A5P29400 1685 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 IGHV3-9P01782 118 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ENPP1P22413 925 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 RIDAP52758 137 aaKnown RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 NPRL2Q8WTW4 380 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 OR6C70A6NIJ9 312 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 SSTR4P31391 388 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 CLDN17P56750 224 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 HNRNPA0Q13151 305 aaKnown RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 TMEM151AQ8N4L1 468 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 C1QTNF2Q9BXJ5 285 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 ARNT2Q9HBZ2 717 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TREX1Q9NSU2 369 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TRAPPC13A5PLN9 417 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 CCSMST1Q4G0I0 132 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 CLEC14AQ86T13 490 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TMEM200AQ86VY9 491 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 CCRL2O00421 344 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TYROBPO43914 113 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 APOC1P02654 83 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 VAMP1P23763 118 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 GPR3P46089 330 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 LTB4RQ15722 352 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 SLC5A12Q1EHB4 618 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 NRMQ8IXM6 262 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 POGLUT1Q8NBL1 392 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 GCDHQ92947 438 aaPredicted RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 FXYD6Q9H0Q3 95 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 METTL8Q9H825 291 aaKnown RBP12.85□□□□□ -0.35
SIX4-201ENST00000216513 ATP23Q9Y6H3 246 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 SDHDO14521 159 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 STT3AP46977 705 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 XIAPP98170 497 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 VMACQ2NL98 169 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 BCL2L15Q5TBC7 163 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 MTFR2Q6P444 385 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TEX26Q8N6G2 289 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 PFDN2Q9UHV9 154 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 OR51B4Q9Y5P0 310 aa12.85□□□□□ -0.35
SIX4-201ENST00000216513 SRRM3A6NNA2 597 aaPredicted RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 M0R3H8 397 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 ADRA1AP35348 466 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 DNTTIP1Q9H147 329 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 DHDHQ9UQ10 334 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 A6NIN4 97 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 HCRTR1O43613 425 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 PTHP01270 115 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 POU3F1Q03052 451 aaPredicted RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 PRSS36Q5K4E3 855 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 ZNF740Q8NDX6 193 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 DNAJA4Q8WW22 397 aaPredicted RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 OR2T1O43869 369 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 TOXO94900 526 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
SIX4-201ENST00000216513 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 OR7D2Q96RA2 312 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 AIG1Q9NVV5 245 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 PRAMEF25A6NGN4 478 aa12.84□□□□□ -0.35
SIX4-201ENST00000216513 CHRNB4P30926 498 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms