RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAM234AQ9H0X4 552 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 SERPINA5P05154 406 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 HOXB5P09067 269 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 POU4F2Q12837 409 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF486Q96H40 463 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 STRADBQ9C0K7 418 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 HAO2Q9NYQ3 351 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 SEC61A1P61619 476 aaKnown RBP12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 HBA1P69905 142 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 CHRNEQ04844 493 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 FBXW12Q6X9E4 464 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 METTL25Q8N6Q8 603 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 HRH4Q9H3N8 390 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 SDR39U1Q9NRG7 319 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 C7orf72A4D263 438 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 TMEM11P17152 192 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 GPR50Q13585 617 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 LILRA3Q8N6C8 439 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 GGHQ92820 318 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 UBE2FQ969M7 185 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 AP1S3Q96PC3 154 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 PFDN5Q99471 154 aa12.79□□□□□ -0.36
TGFBR3-201ENST00000212355 DIRAS3O95661 229 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 TIMP2P16035 220 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 DDCP20711 480 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 COX20Q5RI15 118 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 OR2T4Q8NH00 348 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 NT5C3BQ969T7 300 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 RETREG1Q9H6L5 497 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 GPR45Q9Y5Y3 372 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 DVL2O14641 736 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PRAMEF2O60811 474 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 C1SP09871 688 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 COX15Q7KZN9 410 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 VRK3Q8IV63 474 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 FAM3CQ92520 227 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 CASD1Q96PB1 797 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 TM7SF3Q9NS93 570 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 B3GNT2Q9NY97 397 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF443Q9Y2A4 671 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 RAB3DO95716 219 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 C5AR1P21730 350 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PLAG1Q6DJT9 500 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ADAMTS16Q8TE57 1224 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 KIAA1143Q96AT1 154 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 OR5B12Q96R08 314 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ZNF300Q96RE9 604 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PHB2Q99623 299 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ACTR6Q9GZN1 396 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 AGPAT4Q9NRZ5 378 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ARSBP15848 533 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PCSK2P16519 638 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 MRPL49Q13405 166 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 NHSL2Q5HYW2 709 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 OR5D18Q8NGL1 313 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 NR4A3Q92570 626 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 MAF1Q9H063 256 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 RARRES3Q9UL19 164 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 A0A1W2PQ09 198 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PROS1P07225 676 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 CDK4P11802 303 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PCGF2P35227 344 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 TMEM35AQ53FP2 167 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 RPL13AP3Q6NVV1 102 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
TGFBR3-201ENST00000212355 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 CHRM4P08173 479 aa12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 ADH6P28332 368 aa12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 BDKRB2P30411 391 aa12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 UBE2NP61088 152 aaKnown RBP12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 RPS25P62851 125 aaKnown RBP12.77□□□□□ -0.36
TGFBR3-201ENST00000212355 CDK3Q00526 305 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms