RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SLC38A4Q969I6 547 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ARSGQ96EG1 525 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 APOL4Q9BPW4 351 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CCDC90BQ9GZT6 254 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 DNAJB12Q9NXW2 375 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC39A1Q9NY26 324 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PCDHGA6Q9Y5G7 932 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CNOT1A5YKK6 2376 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CDC14CA4D256 554 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 B4E171 279 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NTN1O95631 604 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TSPAN7P41732 249 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GSSP48637 474 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 EMP2P54851 167 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 UGT2B15P54855 530 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZER1Q7Z7L7 766 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LINC00471Q8N535 108 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TBC1D15Q8TC07 691 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RAB2BQ8WUD1 216 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 METTL21AQ8WXB1 218 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC41A3Q96GZ6 507 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LRFN5Q96NI6 719 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FUNDC2Q9BWH2 189 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WWTR1Q9GZV5 400 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GPN2Q9H9Y4 310 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TESQ9UGI8 421 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ENOPH1Q9UHY7 261 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TNFRSF10AO00220 468 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NOL3O60936 208 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ADAM11O75078 769 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 IL33O95760 270 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MMP11P24347 488 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PSMD4P55036 377 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 DCAF7P61962 342 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 INSM1Q01101 510 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC16A12Q6ZSM3 486 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NKAIN4Q8IVV8 208 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NLGN4XQ8N0W4 816 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 APCDD1LQ8NCL9 501 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CRB3Q9BUF7 120 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 REV1Q9UBZ9 1251 aa18.13■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PCNX3Q9H6A9 2034 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 C4orf47A7E2U8 309 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FMO6PO60774 539 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WBP4O75554 376 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 KLK3P07288 261 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CLDN6P56747 220 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 C1orf94Q6P1W5 598 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC29A4Q7RTT9 530 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 B3GNT7Q8NFL0 401 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 APH1BQ8WW43 257 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 UCK2Q9BZX2 261 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WDR54Q9H977 334 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RASSF1Q9NS23 344 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 AKAP7Q9P0M2 348 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC7A7Q9UM01 511 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 B3GALT1Q9Y5Z6 326 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SDK2Q58EX2 2172 aa18.12■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TEX51A0A1B0GUA7 166 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SAGE2PA6NJ88 616 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 OR6C76A6NM76 312 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CHMP24386 653 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ACVR2AP27037 513 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PTGES3Q15185 160 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 OR1Q1Q15612 314 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 HLA-DQA1Q5Y7H0 255 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF517Q6ZMY9 492 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLCO6A1Q86UG4 719 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 DRAXINQ8NBI3 349 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NFAM1Q8NET5 270 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GPA33Q99795 319 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WDR77Q9BQA1 342 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SEMA4CQ9C0C4 833 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 POLR2J2Q9GZM3 115 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 POLR2J3Q9H1A7 115 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FLRT3Q9NZU0 649 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 WARS2Q9UGM6 360 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF223Q9UK11 482 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TPRKBQ9Y3C4 175 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 LOXL2Q9Y4K0 774 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF99A8MXY4 864 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RFPL3O75679 317 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GGT2P36268 569 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ETV5P41161 510 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MAP2K4P45985 399 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NR0B1P51843 470 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ILKQ13418 452 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 AQP6Q13520 282 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FAM69BQ5VUD6 431 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FAM198BQ6UWH4 519 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ENTHD1Q8IYW4 607 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PRR22Q8IZ63 422 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF441Q8N8Z8 693 aa18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ACOT11Q8WXI4 607 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TRAPPC13A5PLN9 417 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SERINC4A6NH21 518 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MAN1A2O60476 641 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SOX14O95416 240 aa18.1■□□□□ 0.49
TNFRSF1A-201ENST00000162749 OSMP13725 252 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms