RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TRAP1Q12931 704 aaKnown RBP8.62□□□□□ -1.03
PHGDH-228ENST00000641847 GPR68Q15743 365 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.62□□□□□ -1.03
PHGDH-228ENST00000641847 CYP27C1Q4G0S4 372 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 FLYWCH1Q4VC44 716 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 GLYATQ6IB77 296 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 GFRALQ6UXV0 394 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 FRRS1Q6ZNA5 592 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 CCDC80Q76M96 950 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 HMGN2P46Q86SG4 172 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
PHGDH-228ENST00000641847 DHFR2Q86XF0 187 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF619Q8N2I2 560 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 SIRT6Q8N6T7 355 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 BHLHE22Q8NFJ8 381 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-228ENST00000641847 FAM110BQ8TC76 370 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 WDR60Q8WVS4 1066 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 OMA1Q96E52 524 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 LRGUKQ96M69 825 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 SDF2Q99470 211 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 G6PC3Q9BUM1 346 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 LHPPQ9H008 270 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 SLC38A1Q9H2H9 487 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 BCL2L10Q9HD36 194 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 POLE3Q9NRF9 147 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 FBXO34Q9NWN3 711 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 MRTO4Q9UKD2 239 aaKnown RBP8.62□□□□□ -1.03
PHGDH-228ENST00000641847 MKLN1Q9UL63 735 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 WDR45Q9Y484 360 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 EXPH5Q8NEV8 1989 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 A0A0G2JPF8 293 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 HNRNPCL2B2RXH8 293 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 HNRNPCL3B7ZW38 293 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 HS6ST1O60243 411 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 TSPAN2O60636 221 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 FCMRO60667 390 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF354AO60765 605 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ITGA10O75578 1167 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 GCM2O75603 506 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 REM1O75628 298 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 PPM1BO75688 479 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 GUSBP08236 651 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 HNRNPCL4P0DMR1 293 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 KDELR2P33947 212 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 MLF1P58340 268 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 CCNIQ14094 377 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 KPNB1Q14974 876 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 MEP1AQ16819 746 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 MTX3Q5HYI7 312 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 H3F3CQ6NXT2 135 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 RPUSD3Q6P087 351 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 MYO7BQ6PIF6 2116 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ZAR1Q86SH2 424 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 SPATA24Q86W54 205 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 KRT73Q86Y46 540 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 SPPL2CQ8IUH8 684 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 PSMF1Q92530 271 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 DIO2Q92813 273 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 TAMM41Q96BW9 452 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 RNF145Q96MT1 663 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 COL21A1Q96P44 957 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 RASL10BQ96S79 203 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF607Q96SK3 696 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ADOQ96SZ5 270 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 REPIN1Q9BWE0 567 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 QRSL1Q9H0R6 528 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 GORASP2Q9H8Y8 452 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 CACYBPQ9HB71 228 aaKnown RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ZBTB20Q9HC78 741 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 FLRT3Q9NZU0 649 aa8.61□□□□□ -1.03
PHGDH-228ENST00000641847 GPC6Q9Y625 555 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-228ENST00000641847 CNTRLQ7Z7A1 2325 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ZGRF1Q86YA3 2104 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 CPAMD8Q8IZJ3 1885 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 CENPVL1A0A0U1RR11 272 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 TCRBV5S2A0A599 114 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 OR6C70A6NIJ9 312 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ICOSLGO75144 302 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 UGT2B11O75310 529 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SERPINB7O75635 380 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 OR6B1O95007 311 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 UTS2O95399 124 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF682O95780 498 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 IFNA14P01570 189 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 FBXO45P0C2W1 286 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 CYP4B1P13584 511 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ETS2P15036 469 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 RPS4Y1P22090 263 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SOX3P41225 446 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 TMED10P49755 219 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ERFP50548 548 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 RNF144AP50876 292 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SSR4P51571 173 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 CRYBA2P53672 197 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms