RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 IFI44Q8TCB0 444 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CNOT9Q92600 299 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TGM7Q96PF1 710 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 RBM14Q96PK6 669 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 CD244Q9BZW8 370 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SEMA6CQ9H3T2 930 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TUBG2Q9NRH3 451 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ZNF223Q9UK11 482 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 MED16Q9Y2X0 877 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 EXOSC1Q9Y3B2 195 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 MN1Q10571 1320 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 SIGLEC6O43699 453 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 B3GALT2O43825 422 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CLIC3O95833 236 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 IFNA2P01563 188 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 GIMD1P0DJR0 217 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 NTSP30990 170 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 EEF1A1P68104 462 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 ADAM8P78325 824 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 EEF1A2Q05639 463 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 PCBP2Q15366 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TRAM1Q15629 374 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 EEF1A1P5Q5VTE0 462 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 PEAR1Q5VY43 1037 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 BLOC1S3Q6QNY0 202 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ACOT11Q8WXI4 607 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 RGMAQ96B86 450 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 GIMAP5Q96F15 307 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ZNF607Q96SK3 696 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 DPH2Q9BQC3 489 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 DPH7Q9BTV6 452 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 NARFLQ9H6Q4 476 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 C11orf16Q9NQ32 467 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 LYARQ9NX58 379 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 LOC100509620A0A075B734 347 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TRBC2A0A5B9 178 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CIB4A0PJX0 185 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 BHLHE40O14503 412 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 IMPA2O14732 288 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 EEF1E1O43324 174 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 CLEC3AO75596 197 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 GATBO75879 557 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TOXO94900 526 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 RNH1P13489 461 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 GTF2F2P13984 249 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 SLC6A2P23975 617 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 S100GP29377 79 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 UGT2B10P36537 528 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 MRPS10P82664 201 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 GTF2H2Q13888 395 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 IL11RAQ14626 422 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SLC25A25Q6KCM7 469 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 GTF2H2CQ6P1K8 395 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 RFLNAQ6ZTI6 216 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SSX7Q7RTT5 188 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ASPGQ86U10 573 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 IGDCC3Q8IVU1 814 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SLC30A8Q8IWU4 369 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 GLB1L3Q8NCI6 653 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 OR13F1Q8NGS4 319 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 HMGCLL1Q8TB92 370 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SAP25Q8TEE9 199 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 FCAMRQ8WWV6 532 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TM9SF4Q92544 642 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TMEM203Q969S6 136 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CCDC74AQ96AQ1 378 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 PANX1Q96RD7 426 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ZNF382Q96SR6 550 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 RAB33BQ9H082 229 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 OR52A5Q9H2C5 316 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 NANOGQ9H9S0 305 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 THUMPD1Q9NXG2 353 aaKnown RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TRPC4Q9UBN4 977 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TBC1D29Q9UFV1 150 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 TRPS1Q9UHF7 1281 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 COPS3Q9UNS2 423 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 KIAA1671Q9BY89 1806 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 PI4KAP42356 2102 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 NOTCH4Q99466 2003 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CNTRLQ7Z7A1 2325 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 F5H5P2 479 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 ATP6AP2O75787 350 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SC5DO75845 299 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 BCKDHAP12694 445 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CD1DP15813 335 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 HOXA1P49639 335 aaPredicted RBP5.33□□□□□ -1.56
RTTN-218ENST00000640408 GSK3BP49841 420 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 METAP1P53582 386 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SLBPQ14493 270 aaKnown RBP eCLIP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TRAM2Q15035 370 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 CPSF6Q16630 551 aaKnown RBP eCLIP5.33□□□□□ -1.56
RTTN-218ENST00000640408 TATDN3Q17R31 274 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 SLC36A3Q495N2 470 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 DCST1Q5T197 706 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 FRG2Q64ET8 278 aa5.33□□□□□ -1.56
RTTN-218ENST00000640408 STEAP3Q658P3 488 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms