RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DUSP13Q9UII6 198 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 ZNF223Q9UK11 482 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 SLC6A5Q9Y345 797 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 AP4B1Q9Y6B7 739 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 SCN3AQ9NY46 2000 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 UQCRHLA0A096LP55 91 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 A0A0A6YYC8 382 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 FAM95CA0A1B0GW59 222 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 KRT87PA6NCN2 255 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 NUPR2A6NF83 97 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 FAM90A20PA6NIJ5 464 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 MYO1GB0I1T2 1018 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 I3L1I5 382 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 TP53I11O14683 189 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 LIN7AO14910 233 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 PRPSAP2O60256 369 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 PRAMEF4O60810 478 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 TRAPPC6AO75865 159 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 IFNA6P05013 189 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 CCDC175P0C221 793 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 MYBL1P10243 752 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 FDPSP14324 419 aaKnown RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 CDH2P19022 906 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 MSH3P20585 1137 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 RPL4P36578 427 aaKnown RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 EFNB2P52799 333 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 UCP3P55916 312 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 SIRPAP78324 504 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 GALNTL6Q49A17 601 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 C9orf152Q5JTZ5 239 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 NEPROQ6NW34 567 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 LRRC8BQ6P9F7 803 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 HSDL2Q6YN16 418 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 NT5DC3Q86UY8 548 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 BCL6BQ8N143 479 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 RIBC1Q8N443 379 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 RAB42Q8N4Z0 105 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 DPP10Q8N608 796 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 BHLHE22Q8NFJ8 381 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 ZNF480Q8WV37 535 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 RDH5Q92781 318 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 UPRTQ96BW1 309 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 TRIM44Q96DX7 344 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 PLIN2Q99541 437 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 DOHHQ9BU89 302 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 CHID1Q9BWS9 393 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 ADGRE3Q9BY15 652 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 C1orf21Q9H246 121 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 XKR8Q9H6D3 395 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 MID1IP1Q9NPA3 183 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 SNTG1Q9NSN8 517 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 GIMAP4Q9NUV9 329 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 RLIMQ9NVW2 624 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 SLC25A10Q9UBX3 287 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 LIMA1Q9UHB6 759 aaKnown RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 HOOK1Q9UJC3 728 aaKnown RBP2.95□□□□□ -1.94
CCDC7-213ENST00000639290 NFU1Q9UMS0 254 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 KLHL20Q9Y2M5 609 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 USH1CQ9Y6N9 552 aa2.95□□□□□ -1.94
CCDC7-213ENST00000639290 NINQ8N4C6 2090 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 AQP7P3A6NL99 342 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 CCNT2O60583 730 aaKnown RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 LY86O95711 162 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 GRPP07492 148 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 MELTFP08582 738 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 RALBP11234 206 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 MGAT1P26572 445 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 CNTFRP26992 372 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 PIGAP37287 484 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 MXI1P50539 228 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 CTBP2P56545 445 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 RPL7AP62424 266 aaKnown RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 EGR3Q06889 387 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 C17orf67Q0P5P2 114 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 ITGADQ13349 1161 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 RABEP1Q15276 862 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 TMEM154Q6P9G4 183 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 ZDHHC24Q6UX98 284 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 FAM183BPQ6ZVS7 135 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 PRSS41Q7RTY9 318 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 RNF10Q8N5U6 811 aaKnown RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 TEX26Q8N6G2 289 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 FAM83FQ8NEG4 500 aaPredicted RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 DEFB108BQ8NET1 73 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 C22orf15Q8WYQ4 148 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 FGFBP2Q9BYJ0 223 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 DPAGT1Q9H3H5 408 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 TRABDQ9H4I3 376 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 MOV10Q9HCE1 1003 aaKnown RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 BPIFA1Q9NP55 256 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 SNX15Q9NRS6 342 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 ASB6Q9NWX5 421 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 DNAJB9Q9UBS3 223 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 SEC14L4Q9UDX3 406 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 SLC22A7Q9Y694 548 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 CHCHD2Q9Y6H1 151 aaPredicted RBP2.94□□□□□ -1.94
CCDC7-213ENST00000639290 SMAD5-AS1Q9Y6J3 95 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 KCNE2Q9Y6J6 123 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 LOC105369274A0A096LPK9 316 aa2.94□□□□□ -1.94
CCDC7-213ENST00000639290 LOC102723532A0A0G2JNH3 316 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms