RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 WDR36Q8NI36 951 aaKnown RBP2.11□□□□□ -2.07
CD44-239ENST00000639002 TADA1Q96BN2 335 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 ARHGDIGQ99819 225 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 PLA2G2FQ9BZM2 168 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 SLC5A7Q9GZV3 580 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 SH2D2AQ9NP31 389 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 FAM153AQ9UHL3 310 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 RIMS3Q9UJD0 308 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 IFT52Q9Y366 437 aa2.11□□□□□ -2.07
CD44-239ENST00000639002 HSF2BPO75031 334 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 AKR7A3O95154 331 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 HPDP32754 393 aaPredicted RBP2.1□□□□□ -2.07
CD44-239ENST00000639002 GCKP35557 465 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 DHPSP49366 369 aaPredicted RBP2.1□□□□□ -2.07
CD44-239ENST00000639002 CCR6P51684 374 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 ZNF136P52737 540 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 RPL8P62917 257 aaKnown RBP2.1□□□□□ -2.07
CD44-239ENST00000639002 CDKN3Q16667 212 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 C1QTNF12Q5T7M4 302 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 IGFL1Q6UW32 110 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 OLFM4Q6UX06 510 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 DNM1P46Q6ZS02 220 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 TOM1L2Q6ZVM7 507 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 GOLGA7Q7Z5G4 137 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 SFRP1Q8N474 314 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 DEDD2Q8WXF8 326 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 PHYHIPQ92561 330 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 NMNAT2Q9BZQ4 307 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 CWC25Q9NXE8 425 aaPredicted RBP2.1□□□□□ -2.07
CD44-239ENST00000639002 WDR45Q9Y484 360 aa2.1□□□□□ -2.07
CD44-239ENST00000639002 A0A096LNJ9 63 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 A0A0U1RRA0 63 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 A0A1W2PRV1 198 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 NKX2-6A6NCS4 301 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 RIPK2O43353 540 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 BAG2O95816 211 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 SLC35G4P0C7Q5 338 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 GNSP15586 552 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 ZNF18P17022 549 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 TBPP20226 339 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 NTSP30990 170 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 KRT83P78385 493 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 ARF5P84085 180 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 SRYQ05066 204 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 AGKQ53H12 422 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 DNAJC21Q5F1R6 531 aaKnown RBP2.09□□□□□ -2.07
CD44-239ENST00000639002 PVRIGQ6DKI7 326 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 SLC39A4Q6P5W5 647 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 ARSKQ6UWY0 536 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 ZNF410Q86VK4 478 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 IFNEQ86WN2 208 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 OR9A1PQ8NGU1 263 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 C2orf40Q9H1Z8 148 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 COMMD8Q9NX08 183 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 SMC3Q9UQE7 1217 aa2.09□□□□□ -2.07
CD44-239ENST00000639002 IGKV1D-17A0A075B6S4 117 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 SMIM28A0A1B0GU29 152 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 SERPINE3A8MV23 424 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ZNF705EA8MWA4 302 aaPredicted RBP2.08□□□□□ -2.08
CD44-239ENST00000639002 H0YL77 283 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 NBR2O15453 112 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 FMO6PO60774 539 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 OAS2P29728 719 aaKnown RBP2.08□□□□□ -2.08
CD44-239ENST00000639002 ATP6V1E1P36543 226 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 MAGEA4P43358 317 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 SLC6A8P48029 635 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 C17orf67Q0P5P2 114 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ZNF674Q2M3X9 581 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 C2orf76Q3KRA6 126 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 CCDC184Q52MB2 194 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 DLEU7Q6UYE1 221 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 PAQR9Q6ZVX9 377 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 HSD11B1LQ7Z5J1 315 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 SNX32Q86XE0 403 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 LRRC17Q8N6Y2 441 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ARL10Q8N8L6 244 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 SPC24Q8NBT2 197 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ZNF740Q8NDX6 193 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 OR2T33Q8NG76 320 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 OR52I1Q8NGK6 324 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ST7LQ8TDW4 575 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 PHF10Q8WUB8 498 aaKnown RBP2.08□□□□□ -2.08
CD44-239ENST00000639002 OR1E3Q8WZA6 343 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 ATP6V0A1Q93050 837 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 DTD2Q96FN9 168 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 EEF2KMTQ96G04 330 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 PKNOX2Q96KN3 472 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 MTRRQ9UBK8 725 aa2.08□□□□□ -2.08
CD44-239ENST00000639002 IGHV3-64DA0A0J9YX35 117 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 TTC26A0AVF1 554 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 SYCE3A1L190 88 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 TRIM64A6NGJ6 449 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 TRIM64BA6NI03 449 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 ALOX15BO15296 676 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 HCN1O60741 890 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 UFL1O94874 794 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 PNPP00491 289 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 ZCCHC18P0CG32 403 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 HLA-DPA1P20036 260 aa2.07□□□□□ -2.08
CD44-239ENST00000639002 EMDP50402 254 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms