RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 LRRC28Q86X40 367 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-213ENST00000638680 FAM109AQ8N4B1 249 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 CDS1Q92903 461 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 EGLN2Q96KS0 407 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 CTHP32929 405 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 FRMPD2BQ6IN97 320 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 PAQR8Q8TEZ7 354 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 MRI1Q9BV20 369 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 BACE2Q9Y5Z0 518 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 MRPS10P82664 201 aaKnown RBP17.41■□□□□ 0.38
SCARB2-213ENST00000638680 GPR50Q13585 617 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 GALEQ14376 348 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 DEFB110Q30KQ9 67 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 CDRT4Q8N9R6 151 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 C1QTNF2Q9BXJ5 285 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 VSTM5A8MXK1 200 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 THBS2P35442 1172 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 SQSTM1Q13501 440 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 C12orf76Q8N812 135 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-213ENST00000638680 OR7G1Q8NGA0 311 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 OR4F15Q8NGB8 312 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 NT5DC2Q9H857 520 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 GPR39O43194 453 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 GJB3O75712 270 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 DAPP51397 102 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 CICQ96RK0 1608 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 HEPACAM2A8MVW5 462 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 ACP2P11117 423 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 TPT1P13693 172 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 ARSBP15848 533 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 UEVLDQ8IX04 471 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 RRNAD1Q96FB5 475 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 V9GY05 133 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 TRAV27A0A087WT01 109 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 UNCXA6NJT0 531 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 FAM183AA6NL82 134 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 GABRPO00591 440 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 SMAD6O43541 496 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 JUNDP17535 347 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 RBMS1P29558 406 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 SUOXP51687 545 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 PER3P56645 1201 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 TUBB3Q13509 450 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 MEPCEQ7L2J0 689 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 RETREG3Q86VR2 466 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 LSMEM2Q8N112 164 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 IL17RDQ8NFM7 739 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 NAALAD2Q9Y3Q0 740 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 MYADML2A6NDP7 307 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 NOVP48745 357 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 NKX6-1P78426 367 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 SGPP2Q8IWX5 399 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 CCDC71LQ8N9Z2 235 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 ADAMTS18Q8TE60 1221 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 FAM71F1Q96KD3 344 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-213ENST00000638680 MACROD1Q9BQ69 325 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 DNTTIP1Q9H147 329 aa17.4■□□□□ 0.38
SCARB2-213ENST00000638680 IFNA4P05014 189 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 EPHA1P21709 976 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 RAB4BP61018 213 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 OR2G6Q5TZ20 316 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 HACD4Q5VWC8 232 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 BPIFA2Q96DR5 249 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 METTL2AQ96IZ6 378 aaKnown RBP17.39■□□□□ 0.38
SCARB2-213ENST00000638680 SMIM14Q96QK8 99 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 ZFP57Q9NU63 452 aa17.39■□□□□ 0.38
SCARB2-213ENST00000638680 POM121CA8CG34 1229 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 WASH4PA8MWX3 477 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 APBB3O95704 486 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 GAAP10253 952 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 MSX1P28360 303 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 EEF1A1P5Q5VTE0 462 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 GIMAP1Q8WWP7 306 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 OR52D1Q9H346 318 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 AQP9O43315 295 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 NSDHLQ15738 373 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF761Q86XN6 746 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-213ENST00000638680 GPR137CQ8N3F9 429 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 MYLIPQ8WY64 445 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ELP4Q96EB1 424 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ZFYVE21Q9BQ24 234 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 FAM86C1Q9NVL1 165 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 BABAM2Q9NXR7 383 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 A6NLC8 198 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 TNFSF12O43508 249 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 SRPX2O60687 465 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-213ENST00000638680 RAB6AP20340 208 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 CCR7P32248 378 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 LEXMQ3ZCV2 418 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 HSD11B1LQ7Z5J1 315 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF695Q8IW36 515 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 GGT3PA6NGU5 568 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 RAB3AP20336 220 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ENTPD8Q5MY95 495 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF704Q6ZNC4 412 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-213ENST00000638680 VRK2Q86Y07 508 aa17.39■□□□□ 0.37
SCARB2-213ENST00000638680 GPR174Q9BXC1 333 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms