RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 EIPR1Q53HC9 387 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 TBC1D3GQ6DHY5 549 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF836Q6ZNA1 936 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 OAFQ86UD1 273 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 TIMP4Q99727 224 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 THAP7Q9BT49 309 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ENAMQ9NRM1 1142 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 PHPT1Q9NRX4 125 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 WDR45Q9Y484 360 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 GALEQ14376 348 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ESCO2Q56NI9 601 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 FAM111BQ6SJ93 734 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 B3GLCTQ6Y288 498 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ADGRD2Q7Z7M1 963 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 FANK1Q8TC84 345 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 CDS1Q92903 461 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF707Q96C28 371 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 B3GNT2Q9NY97 397 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 INSL6Q9Y581 213 aa18.73■□□□□ 0.59
SYNGAP1-227ENST00000638142 CMPK1P30085 196 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ACSL1P33121 698 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 CTNNB1P35222 781 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 THBS2P35442 1172 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 PITPNBP48739 271 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 LRRC32Q14392 662 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 IRF4Q15306 451 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 AGBL4Q5VU57 503 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 HACD4Q5VWC8 232 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 RANBP3LQ86VV4 465 aaPredicted RBP18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 TPRA1Q86W33 373 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 TMEM99Q8N816 258 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR7G2Q8NG99 324 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ART5Q96L15 291 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ATP13A2Q9NQ11 1180 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 A0A1W2PQ72 361 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 DAPL1A0PJW8 107 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 SMLR1H3BR10 107 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 PAHP00439 452 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 NPR2P20594 1047 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF136P52737 540 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ARHGAP11BQ3KRB8 267 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 LRRC25Q8N386 305 aaPredicted RBP18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR5W2Q8NH69 310 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 NACC2Q96BF6 587 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 CD180Q99467 661 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 ABCG5Q9H222 651 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 SYNPO2LQ9H987 977 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 TEKT2Q9UIF3 430 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 NCKAP1Q9Y2A7 1128 aa18.72■□□□□ 0.59
SYNGAP1-227ENST00000638142 TRAPPC13A5PLN9 417 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 OR52A4PA6NMU1 304 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 BHLHE40O14503 412 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 EIF4EP06730 217 aaKnown RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 THBS1P07996 1170 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 M6PRP20645 277 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 SHC1P29353 583 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 PEBP1P30086 187 aaKnown RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 BTN3A2P78410 334 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 DUSP8Q13202 625 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 ANGPT1Q15389 498 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF425Q6IV72 752 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 SFXN4Q6P4A7 337 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 GPALPP1Q8IXQ4 340 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 RNF113BQ8IZP6 322 aaKnown RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 GHDCQ8N2G8 530 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 C9orf62Q8N4C0 152 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 SAMD12Q8N8I0 201 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 SPPL3Q8TCT6 385 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 C10orf90Q96M02 699 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 HS6ST2Q96MM7 605 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 DHRS9Q9BPW9 319 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 PRSS27Q9BQR3 290 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 DPH1Q9BZG8 443 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 C6orf106Q9H6K1 298 aaPredicted RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZDHHC4Q9NPG8 344 aa18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 SIDT1Q9NXL6 827 aaKnown RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 MRPL39Q9NYK5 338 aaKnown RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 ZNF223Q9UK11 482 aaPredicted RBP18.71■□□□□ 0.59
SYNGAP1-227ENST00000638142 HRO43593 1189 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 LANCL1O43813 399 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 RNGTTO60942 597 aaKnown RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 MT-ND5P03915 603 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 BMP7P18075 431 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 FXYD6P3P58550 94 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 EEF1A1P68104 462 aaKnown RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZNF782Q6ZMW2 699 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 ASB18Q6ZVZ8 466 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 GET4Q7L5D6 327 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 SAMD14Q8IZD0 417 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 LNX2Q8N448 690 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 KISS1RQ969F8 398 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 TRIM43Q96BQ3 446 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 NDC1Q9BTX1 674 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 PIGUQ9H490 435 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 SPHK1Q9NYA1 384 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 PCDH10Q9P2E7 1040 aa18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 THAP10Q9P2Z0 257 aaPredicted RBP18.71■□□□□ 0.58
SYNGAP1-227ENST00000638142 RASD1Q9Y272 281 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms