RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LIM2P55344 173 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 CXADRP78310 365 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SIM1P81133 766 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 BCL2L1Q07817 233 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 GINS1Q14691 196 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 LIPJQ5W064 366 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 OR4F15Q8NGB8 312 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 CPNE4Q96A23 557 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 MAGEH1Q9H213 219 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 HRASLSQ9HDD0 168 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 NFKBIL1Q9UBC1 381 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 VPS29Q9UBQ0 182 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF629Q9UEG4 869 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SMIM35A0A1B0GVV1 85 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SLC9B1P1A6NJY1 282 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 IQCF5A8MTL0 148 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 LILRB5O75023 590 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 REM1O75628 298 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 IGF2P01344 180 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 HOXC4P09017 264 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 ADCYAP1P18509 176 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 IDSP22304 550 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RPL3P39023 403 aaKnown RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 CD79BP40259 229 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RAD52P43351 418 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SLC6A12P48065 614 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RAB4BP61018 213 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 AP1S1P61966 158 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 CAP1Q01518 475 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 DEFA6Q01524 100 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 UAP1L1Q3KQV9 507 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 IL20RBQ6UXL0 311 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 KRT77Q7Z794 578 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SLC43A2Q8N370 569 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 TEX19Q8NA77 164 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 TMEM185AQ8NFB2 350 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 SORCS1Q8WY21 1168 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 THAP4Q8WY91 577 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 TINF2Q9BSI4 451 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 BRF2Q9HAW0 419 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 BEX1Q9HBH7 125 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 MYO16Q9Y6X6 1858 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 RDH16O75452 317 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 GJB3O75712 270 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SPDEFO95238 335 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 IFNGP01579 166 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 KLK3P07288 261 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ABOP16442 354 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 PMELP40967 661 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 MNDAP41218 407 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ACTR1BP42025 376 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 CCR8P51685 355 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 DGKEP52429 567 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ACSM2AQ08AH3 577 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 PDZK1IP1Q13113 114 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 NFATC2Q13469 925 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ARHGEF7Q14155 803 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ENTPD8Q5MY95 495 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 COX20Q5RI15 118 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ACSM2BQ68CK6 577 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ADNP2Q6IQ32 1131 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 FBXL22Q6P050 247 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 B3GLCTQ6Y288 498 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 GPR142Q7Z601 462 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 RFKQ969G6 155 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SEC11CQ9BY50 192 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 QRSL1Q9H0R6 528 aaKnown RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 KLHL1Q9NR64 748 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 IL17CQ9P0M4 197 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF69Q9UC07 566 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 FBXW2Q9UKT8 454 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 FLVCR2Q9UPI3 526 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 C9orf170A2RU37 121 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ANKRD66B4E2M5 251 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 F5H5P2 479 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 MAN2B1O00754 1011 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 ARPC1BO15143 372 aaKnown RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 PRKRAO75569 313 aaKnown RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 KRT33AO76009 404 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 C8GP07360 202 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 MUC1P15941 1255 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-221ENST00000638141 GSTM3P21266 225 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 HTR2AP28223 471 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 NOS3P29474 1203 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 GCGRP47871 477 aa11.23□□□□□ -0.61
CAPN3-221ENST00000638141 SPCS3P61009 180 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms