RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TCN2P20062 427 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 ENDOUP21128 410 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 ELAVL4P26378 380 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 NR0B1P51843 470 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 ZNF136P52737 540 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 PNLIPRP2P54317 469 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 RPS15P62841 145 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 MERTKQ12866 999 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 EFR3AQ14156 821 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 GANABQ14697 944 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 EXOC3L2Q2M3D2 409 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 PLAG1Q6DJT9 500 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 PLEKHM3Q6ZWE6 761 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 HS3ST5Q8IZT8 346 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 CLIP4Q8N3C7 705 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 FAM71CQ8NEG0 241 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 OR10G2Q8NGC3 310 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 M1APQ8TC57 530 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 EFHD2Q96C19 240 aaPredicted RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 C8orf44Q96CB5 159 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 WFDC6Q9BQY6 131 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 FUZQ9BT04 418 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 FNDC11Q9BVV2 318 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 EXOSC3Q9NQT5 275 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 DNAJB12Q9NXW2 375 aaKnown RBP14.14□□□□□ -0.15
CLN6-219ENST00000637329 ENOPH1Q9UHY7 261 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 AK5Q9Y6K8 562 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 SERINC4A6NH21 518 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 OR6C70A6NIJ9 312 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 TAF4O00268 1085 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 SCDO00767 359 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 SOCS6O14544 535 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 RAD1O60671 282 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 CCNB2O95067 398 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 UTS2O95399 124 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 NAGAP17050 411 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 TBXA2RP21731 343 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ABCD3P28288 659 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 CAPGP40121 348 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 YAP1P46937 504 aaKnown RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 TAS2R41P59536 307 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ST3GAL3Q11203 375 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 PPP1R8Q12972 351 aaKnown RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 DNASE1L3Q13609 305 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 KLHL26Q53HC5 615 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 FGD3Q5JSP0 725 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ZNF550Q7Z398 422 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 CHERPQ8IWX8 916 aaKnown RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 MARVELD2Q8N4S9 558 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 DHRSXQ8N5I4 330 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ATG16L2Q8NAA4 619 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ELP5Q8TE02 316 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ADAMTS14Q8WXS8 1223 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 TFAP2CQ92754 450 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 OMA1Q96E52 524 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 IMMP1LQ96LU5 166 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ALPK1Q96QP1 1244 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 LMF1Q96S06 567 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 ZNF559Q9BR84 538 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 MMP25Q9NPA2 562 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 RLIMQ9NVW2 624 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 TMEFF2Q9UIK5 374 aaPredicted RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 FARSAQ9Y285 508 aaKnown RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 PCDHGA6Q9Y5G7 932 aa14.13□□□□□ -0.15
CLN6-219ENST00000637329 MAGED1Q9Y5V3 778 aaPredicted RBP14.13□□□□□ -0.15
CLN6-219ENST00000637329 SEC16AO15027 2179 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 CLDN24A6NM45 220 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 H3BNH8 94 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 TERTO14746 1132 aaKnown RBP14.12□□□□□ -0.15
CLN6-219ENST00000637329 FRS3O43559 492 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 PPM1BO75688 479 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ADAP00813 363 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 CSTAP01040 98 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ITGAMP11215 1152 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 CYP4B1P13584 511 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 HPGDP15428 266 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 GABREP78334 506 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 PLAURQ03405 335 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 PIN1Q13526 163 aaPredicted RBP14.12□□□□□ -0.15
CLN6-219ENST00000637329 SSPNQ14714 243 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 TRAM2Q15035 370 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 SLC36A3Q495N2 470 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ENTPD8Q5MY95 495 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 DCST1Q5T197 706 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 C6orf52Q5T4I8 152 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 FNDC7Q5VTL7 733 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ZNF613Q6PF04 617 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 NDUFAF7Q7L592 441 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 SLC15A4Q8N697 577 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ZNF614Q8N883 585 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 OR11G2Q8NGC1 345 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 SLC22A8Q8TCC7 542 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 NR1H4Q96RI1 486 aaPredicted RBP14.12□□□□□ -0.15
CLN6-219ENST00000637329 MCHR1Q99705 422 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 MESP1Q9BRJ9 268 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 SMURF2Q9HAU4 748 aa14.12□□□□□ -0.15
CLN6-219ENST00000637329 KRT84Q9NSB2 600 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms