RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CLCA2Q9UQC9 943 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 PCDH17O14917 1159 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NUPL2O15504 423 aaKnown RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 ZNF780AO75290 641 aaPredicted RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 MYF5P13349 255 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 ETV6P41212 452 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 SHC2P98077 582 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 GPAT3Q53EU6 434 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 AHSA2Q719I0 299 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 GKN2Q86XP6 184 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 GEMIN6Q8WXD5 167 aaKnown RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 ST8SIA2Q92186 375 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 TTC9Q92623 222 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NUAK2Q9H093 628 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 CHRDQ9H2X0 955 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 RASSF1Q9NS23 344 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 TOR4AQ9NXH8 423 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 MAT2BQ9NZL9 334 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 P2RX2Q9UBL9 471 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NUP50Q9UKX7 468 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 POMT2Q9UKY4 750 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 RNF6Q9Y252 685 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 PCDH15Q96QU1 1955 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 MEIOCA2RUB1 952 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 AKR7A2O43488 359 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 CXCL12P48061 93 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 EFR3AQ14156 821 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 MAD2L1BPQ15013 274 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 FAM111BQ6SJ93 734 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ZNF517Q6ZMY9 492 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 COMTD1Q86VU5 262 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 LSRQ86X29 649 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 SLC5A8Q8N695 610 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TTC29Q8NA56 475 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 CADM4Q8NFZ8 388 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR7G2Q8NG99 324 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR4K14Q8NGD5 310 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR9Q2Q8NGE9 314 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR9A4Q8NGU2 314 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 PIK3R3Q92569 461 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ITPAQ9BY32 194 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 BCL2L14Q9BZR8 327 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 POLE3Q9NRF9 147 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 SIT1Q9Y3P8 196 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 CASC3O15234 703 aaKnown RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 EMC8O43402 210 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 FHP07954 510 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 CHRM4P08173 479 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TLX1P31314 330 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 GFERP55789 205 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 FUT5Q11128 374 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 BAK1Q16611 211 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR7E24Q6IFN5 339 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 DEF8Q6ZN54 512 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 RNF44Q7L0R7 432 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR4D11Q8NGI4 311 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 SLC7A6Q92536 515 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ZG16BQ96DA0 208 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 SEMA6CQ9H3T2 930 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 PHF11Q9UIL8 331 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 SLC22A7Q9Y694 548 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TOR1AO14656 332 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ADAMDEC1O15204 470 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 RDH16O75452 317 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 IFNW1P05000 195 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ADRA2AP08913 450 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 IFI30P13284 250 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 EDN3P14138 238 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 PRR5P85299 388 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 IL18R1Q13478 541 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TRMT12Q53H54 448 aaKnown RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 AADACL4Q5VUY2 407 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 CYP4Z2PQ8N1L4 340 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 LRRC25Q8N386 305 aaPredicted RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 TRMT61AQ96FX7 289 aaKnown RBP10.73□□□□□ -0.69
CLN6-217ENST00000636964 TGM7Q96PF1 710 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 OR7D2Q96RA2 312 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 EPYCQ99645 322 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ZPBPQ9BS86 351 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 GABARAPL1Q9H0R8 117 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 C3orf14Q9HBI5 128 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 CTPS2Q9NRF8 586 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TPRKBQ9Y3C4 175 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 HCN4Q9Y3Q4 1203 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
CLN6-217ENST00000636964 TEX51A0A1B0GUA7 166 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 LEUTXA8MZ59 168 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 FFAR1O14842 300 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 FGF17O60258 216 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 TPST2O60704 377 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 FAM20BO75063 409 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 SEMA7AO75326 666 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 CYP7B1O75881 506 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 PROS1P07225 676 aa10.72□□□□□ -0.69
CLN6-217ENST00000636964 SLC15A1P46059 708 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms