RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	PPM1D	O15297	605 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TOX	O94900	526 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	PRAMEF12	O95522	483 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	ADA	P00813	363 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	EGF	P01133	1207 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TFPI	P10646	304 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	PAX6	P26367	422 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	CTSO	P43234	321 aa	Predicted RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SPINT3	P49223	89 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	RIDA	P52758	137 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	ST8SIA6	P61647	398 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TNFRSF17	Q02223	184 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	MTAP	Q13126	283 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC14A1	Q13336	389 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	KCNAB1	Q14722	419 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	PON3	Q15166	354 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SGO1	Q5FBB7	561 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	FAM74A1	Q5RGS3	127 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	KIAA1161	Q6NSJ0	714 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	FAM122B	Q7Z309	247 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC9B2	Q86UD5	537 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TMEM25	Q86YD3	366 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	PUSL1	Q8N0Z8	303 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC43A2	Q8N370	569 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	OXR1	Q8N573	874 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	FAM26E	Q8N5C1	309 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	CELF5	Q8N6W0	485 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SPPL2A	Q8TCT8	520 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	CDK15	Q96Q40	435 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	SMG9	Q9H0W8	520 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	HCFC1R1	Q9NWW0	138 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	RASL12	Q9NYN1	266 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TAS2R3	Q9NYW6	316 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	DNAJC27	Q9NZQ0	273 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	B4GALT6	Q9UBX8	382 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TES	Q9UGI8	421 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	CLEC4E	Q9ULY5	219 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	DENND4A	Q7Z401	1863 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	HTT	P42858	3142 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	TMEM218	A2RU14	115 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	NAP1L6	A6NFF2	107 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	GABRR3	A8MPY1	467 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IQCF5	A8MTL0	148 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	HIDE1	A8MVS5	230 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	TMEM229A	B2RXF0	380 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	MCIDAS	D6RGH6	385 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	PRR23D1	E9PI22	279 aa	Predicted RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IMPA2	O14732	288 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	TERT	O14746	1132 aa	Known RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	FPGT	O14772	594 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC31A2	O15432	143 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	GSTZ1	O43708	216 aa	Predicted RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	PRMT3	O60678	531 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IFNG	P01579	166 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	HPX	P02790	462 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IL5	P05113	134 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	C1S	P09871	688 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	EBLN1	P0CF75	366 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	RNF224	P0DH78	156 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IFNGR1	P15260	489 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	EPB42	P16452	691 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	FPR3	P25089	353 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	GK	P32189	559 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	CD79B	P40259	229 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	CCR2	P41597	374 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	MTNR1B	P49286	362 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ARFIP1	P53367	373 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	TAS2R60	P59551	318 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SNRPE	P62304	92 aa	Known RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	HTR4	Q13639	388 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	KRT33B	Q14525	404 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	HEPACAM	Q14CZ8	416 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	FBXO48	Q5FWF7	155 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ARSI	Q5FYB1	569 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ELFN2	Q5R3F8	820 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	LY6G5C	Q5SRR4	150 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	TMEM240	Q5SV17	173 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	HBM	Q6B0K9	141 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	FAM111B	Q6SJ93	734 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	CASP12	Q6UXS9	341 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306		Q6ZVU0	165 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	MOB3C	Q70IA8	216 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SIAH3	Q8IW03	269 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ARIH2OS	Q8N7S6	290 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SPPL3	Q8TCT6	385 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	GNPDA2	Q8TDQ7	276 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ASB13	Q8WXK3	278 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	EXOSC8	Q96B26	276 aa	Known RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	BOC	Q9BWV1	1114 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC38A1	Q9H2H9	487 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	IPPK	Q9H8X2	491 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	BARX1	Q9HBU1	254 aa	Predicted RBP	10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	ZSCAN32	Q9NX65	697 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	FBXL3	Q9UKT7	428 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	CCL26	Q9Y258	94 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	CBY1	Q9Y3M2	126 aa		10.07	□□□□□ -0.8
CHD2-223	ENST00000636306	SNRPGP15	A8MWD9	76 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NUDT19	A8MXV4	375 aa		10.06	□□□□□ -0.8

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