RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 YTHDF1Q9BYJ9 559 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OSBPL8Q9BZF1 889 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ACPTQ9BZG2 426 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZBP1Q9H171 429 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TRPV6Q9H1D0 765 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CXXC4Q9H2H0 198 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DCLRE1BQ9H816 532 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 UBE2ZQ9H832 354 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ESM1Q9NQ30 184 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF275Q9NSD4 429 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DDX28Q9NUL7 540 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 HYPKQ9NX55 129 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CLEC5AQ9NY25 188 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 AKAP7Q9P0M2 348 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 IL17CQ9P0M4 197 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 VPS54Q9P1Q0 977 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 UBQLN2Q9UHD9 624 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPAN16Q9UKR8 245 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 IKZF3Q9UKT9 509 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SPATA2Q9UM82 520 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ENTPD4Q9Y227 616 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FKBP7Q9Y680 259 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 HEATR5BQ9P2D3 2071 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZFYVE26Q68DK2 2539 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GRIN2DO15399 1336 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 KIF16BQ96L93 1317 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF532Q9HCE3 1301 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 XIRP2A4UGR9 3374 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 VPS13AQ96RL7 3174 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DCHS1Q96JQ0 3298 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PLIN4Q96Q06 1357 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 KNTC1P50748 2209 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIOO75962 3097 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PTPN13Q12923 2485 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ICE1Q9Y2F5 2266 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ACACAQ13085 2346 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PCNX2A6NKB5 2137 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TPRP12270 2363 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GPR179Q6PRD1 2367 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MUC3AQ02505 3323 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 A0A0D9SFI3 127 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 KLF18A0A0U1RQI7 1052 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM170AA1A519 330 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM168BA1KXE4 195 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GTPBP10A4D1E9 387 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM150BA6NC51 233 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C5orf51A6NDU8 294 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MFSD2BA6NFX1 497 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FRG2CA6NGY1 282 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC69A6NI79 296 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 A8MX80 341 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C11orf98E9PRG8 122 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 G3V3Y1 287 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 H0Y9J4 135 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CYB561D2O14569 222 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HTATSF1O43719 755 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 LCMT2O60294 686 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 RANBP6O60518 1105 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 AKAP3O75969 853 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PDE5AO76074 875 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 NOL4O94818 638 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 REC8O95072 547 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 STBD1O95210 358 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GJB5O95377 273 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 APBB3O95704 486 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SNAI1O95863 264 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 NDUFB10O96000 172 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ACTL6AO96019 429 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PRB1P04280 392 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ASGR1P07306 291 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HCKP08631 526 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SNRPCP09234 159 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HOXB7P09629 217 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ALPIP09923 528 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HIST1H2AGP0C0S8 130 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 UBTFL1P0CB47 393 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GOLGA8HP0CJ92 632 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GLULP15104 373 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PVRP15151 417 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 AREGP15514 252 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 VCLP18206 1134 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MUTP22033 750 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 DNAJB1P25685 340 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ATP5DP30049 168 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 OR1D2P34982 312 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 COPB2P35606 906 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM23P36406 574 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MDH2P40926 338 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 RGRP47804 291 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PITPNBP48739 271 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 P2RY4P51582 365 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CCR4P51679 360 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HNRNPA3P51991 378 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF131P52739 623 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ACLYP53396 1101 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC12A3P55017 1021 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CASP9P55211 416 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms