RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PAK1IP1Q9NWT1 392 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CNOT2Q9NZN8 540 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FTSJ1Q9UET6 329 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 KCNE3Q9Y6H6 103 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 XIRP2A4UGR9 3374 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 A0A1W2PS29 197 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 HYKKA2RU49 373 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF860A6NHJ4 632 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SGK494L7N484 410 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CHST10O43529 356 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FGF17O60258 216 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OR10H2O60403 315 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CYP7B1O75881 506 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 DBIP07108 87 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 POU1F1P28069 291 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PCSK6P29122 969 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ALDH4A1P30038 563 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PTGER1P34995 402 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 AVPR1BP47901 424 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PITPNBP48739 271 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 NXPH1P58417 271 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SNRPGP62308 76 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OLR1P78380 273 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SHC2P98077 582 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PIGFQ07326 219 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 DUSP8Q13202 625 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CAMK2DQ13557 499 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 TBCEQ15813 527 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FHL5Q5TD97 284 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PGBD2Q6P3X8 592 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FAM111BQ6SJ93 734 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CASP12Q6UXS9 341 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF600Q6ZNG1 722 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 LACC1Q8IV20 430 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF595Q8IYB9 648 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CARFQ8N187 725 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 STX19Q8N4C7 294 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 DEFB119Q8N690 84 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 RNF152Q8N8N0 203 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SLC16A11Q8NCK7 471 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SLC7A13Q8TCU3 470 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 APH1BQ8WW43 257 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CDS1Q92903 461 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CLDN23Q96B33 292 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ABHD1Q96SE0 405 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FOXQ1Q9C009 403 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 NCOR1P1Q9H4R4 102 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF226Q9NYT6 803 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 MUTYHQ9UIF7 546 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF443Q9Y2A4 671 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 MRPS2Q9Y399 296 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 TLCD2A6NGC4 264 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 H3BN98 237 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 K7ESF4 209 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 CTNSO60931 367 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 LDB3O75112 727 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 STX11O75558 287 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 OR5F1O95221 314 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ATE1O95260 518 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 NSA2O95478 260 aaKnown RBP6.65□□□□□ -1.34
BRCA1-230ENST00000634433 BCL10O95999 233 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 PLATP00750 562 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 CDK1P06493 297 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 GUSBP08236 651 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 S100A5P33763 92 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 CXCL12P48061 93 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 PDX1P52945 283 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 EMP3P54852 163 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 RGS8P57771 180 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-230ENST00000634433 HTD2P86397 168 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 SEC23BQ15437 767 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ZNHIT3Q15649 155 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-230ENST00000634433 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ZSWIM7Q19AV6 140 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 PRICKLE4Q2TBC4 344 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 C14orf28Q4W4Y0 310 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ENTPD8Q5MY95 495 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 UBE2UQ5VVX9 321 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 SLX4IPQ5VYV7 408 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 DESI1Q6ICB0 168 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 C1orf94Q6P1W5 598 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 FRRS1Q6ZNA5 592 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 AHSA2Q719I0 299 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 SFTPA2Q8IWL1 248 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 COX18Q8N8Q8 333 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 GATAD2BQ8WXI9 593 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 GGHQ92820 318 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 UBE2FQ969M7 185 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF578Q96N58 590 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-230ENST00000634433 SDF2Q99470 211 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 FUNDC2Q9BWH2 189 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 TEX12Q9BXU0 123 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 PRRG3Q9BZD7 231 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 FAM60AQ9NP50 221 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ADAP2Q9NPF8 381 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 ACOT13Q9NPJ3 140 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 FKBP14Q9NWM8 211 aa6.65□□□□□ -1.34
BRCA1-230ENST00000634433 REV1Q9UBZ9 1251 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms