RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 HSPB2Q16082 182 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 ARHGAP11BQ3KRB8 267 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 GLYR1Q49A26 553 aaPredicted RBP18.9■□□□□ 0.62
SF1-221ENST00000633899 C6orf10Q5SRN2 563 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 CHMP1BQ7LBR1 199 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 RNF130Q86XS8 419 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 CHDHQ8NE62 594 aaPredicted RBP18.9■□□□□ 0.62
SF1-221ENST00000633899 B4GALNT2Q8NHY0 566 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 ZPLD1Q8TCW7 415 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 THOC1Q96FV9 657 aaKnown RBP18.9■□□□□ 0.62
SF1-221ENST00000633899 ITCHQ96J02 903 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 RUBCNLQ9H714 662 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 KCNJ16Q9NPI9 418 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 Q9UFV3 132 aa18.9■□□□□ 0.62
SF1-221ENST00000633899 A0A087WZY1 265 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 H3BML4 177 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 GTPBP1O00178 669 aaKnown RBP18.89■□□□□ 0.61
SF1-221ENST00000633899 NUDT14O95848 222 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 ADH7P40394 386 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 LHX2P50458 406 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 TXNL4AP83876 142 aaKnown RBP18.89■□□□□ 0.61
SF1-221ENST00000633899 CD226Q15762 336 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 NSUN5P2Q63ZY6 315 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 UBQLNLQ8IYU4 475 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 MEIOBQ8N635 442 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 OR5M1Q8NGP8 315 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 LILRB4Q8NHJ6 448 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 RAB8BQ92930 207 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 STOML1Q9UBI4 398 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 DTNAQ9Y4J8 743 aa18.89■□□□□ 0.61
SF1-221ENST00000633899 OR2M5A3KFT3 312 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 CD8B2A6NJW9 211 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 HNRNPRO43390 633 aaKnown RBP18.88■□□□□ 0.61
SF1-221ENST00000633899 ZNF708P17019 499 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 RNF144AP50876 292 aaPredicted RBP18.88■□□□□ 0.61
SF1-221ENST00000633899 CLDN18P56856 261 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 EEFSECP57772 596 aaKnown RBP18.88■□□□□ 0.61
SF1-221ENST00000633899 B3GALT5-AS1P59052 145 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 GPAT3Q53EU6 434 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 ARSKQ6UWY0 536 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 TMCO5AQ8N6Q1 288 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 PNPT1Q8TCS8 783 aaKnown RBP18.88■□□□□ 0.61
SF1-221ENST00000633899 SMPDL3BQ92485 455 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 ROPN1LQ96C74 230 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 TUBA1CQ9BQE3 449 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 NMUR2Q9GZQ4 415 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 CALHM2Q9HA72 323 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 NPHS2Q9NP85 383 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 DCTN4Q9UJW0 460 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 MKLN1Q9UL63 735 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 WDR45Q9Y484 360 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 DOCK7Q96N67 2140 aa18.88■□□□□ 0.61
SF1-221ENST00000633899 NKX2-6A6NCS4 301 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 SEC14L5O43304 696 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 EDF1O60869 148 aaKnown RBP18.87■□□□□ 0.61
SF1-221ENST00000633899 COX6B1P14854 86 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 TIMP3P35625 211 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 IRX1P78414 480 aaPredicted RBP18.87■□□□□ 0.61
SF1-221ENST00000633899 SQLEQ14534 574 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 BCL2A1Q16548 175 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 KLHL26Q53HC5 615 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 PDZK1Q5T2W1 519 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 HEPHL1Q6MZM0 1159 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 TNIP2Q8NFZ5 429 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 VPS33AQ96AX1 596 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 ZBTB8AQ96BR9 441 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 SIKE1Q9BRV8 207 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 UCK2Q9BZX2 261 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 ZNF350Q9GZX5 532 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 KIAA1549Q9HCM3 1950 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 MED4Q9NPJ6 270 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 CCDC167Q9P0B6 97 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 TRIM33Q9UPN9 1127 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 ZNF337Q9Y3M9 751 aa18.87■□□□□ 0.61
SF1-221ENST00000633899 HCFC1P51610 2035 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 CLCA1A8K7I4 914 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 KDM4EB2RXH2 506 aaPredicted RBP18.86■□□□□ 0.61
SF1-221ENST00000633899 NPIPB9F8W1W9 429 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 NR5A2O00482 541 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 DVL2O14641 736 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 TNFRSF21O75509 655 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 UBL4AP11441 157 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 ZNF17P17021 662 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 MRPL19P49406 292 aaKnown RBP18.86■□□□□ 0.61
SF1-221ENST00000633899 P2RX1P51575 399 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 CCR4P51679 360 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 ZNF117Q03924 483 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 SLC25A35Q3KQZ1 300 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.86■□□□□ 0.61
SF1-221ENST00000633899 SEM1Q6ZVN7 128 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 P4HA3Q7Z4N8 544 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 GRAMD2AQ8IUY3 354 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 RFWD2Q8NHY2 731 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 MARVELD3Q96A59 401 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 RABEP2Q9H5N1 569 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 POLE3Q9NRF9 147 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 MED17Q9NVC6 651 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 LIPT1Q9Y234 373 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 CARD8Q9Y2G2 431 aa18.86■□□□□ 0.61
SF1-221ENST00000633899 AP4B1Q9Y6B7 739 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms