RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR2W6PQ8NHA6 318 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 METTL6Q8TCB7 284 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 RNF128Q8TEB7 428 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 ZBTB8AQ96BR9 441 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 LMF2Q9BU23 707 aaKnown RBP13.04□□□□□ -0.32
PNKP-218ENST00000625299 CACNG6Q9BXT2 260 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 GLIPR2Q9H4G4 154 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 KLHL13Q9P2N7 655 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 LPAR3Q9UBY5 353 aa13.04□□□□□ -0.32
PNKP-218ENST00000625299 A0A096LNT2 108 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 SHISA9B4DS77 424 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 ABCD4O14678 606 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 ULK1O75385 1050 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 LYZL6O75951 148 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 SUPT7LO94864 414 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 PSMG1O95456 288 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 OXSR1O95747 527 aaPredicted RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 PYGBP11216 843 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 SHC1P29353 583 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 HSD17B3P37058 310 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 IRX1P78414 480 aaPredicted RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 VLDLRP98155 873 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 SLC18A2Q05940 514 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 RASA2Q15283 850 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 RNPS1Q15287 305 aaKnown RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 SPDYAQ5MJ70 313 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 CPTPQ5TA50 214 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 AGAP6Q5VW22 663 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 SEZ6L2Q6UXD5 910 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 DNAJC14Q6Y2X3 702 aaPredicted RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 IL17RELQ6ZVW7 336 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 ARIH2OSQ8N7S6 290 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 FBXO30Q8TB52 745 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 MRPL57Q9BQC6 102 aaKnown RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 SRXN1Q9BYN0 137 aa13.03□□□□□ -0.32
PNKP-218ENST00000625299 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
PNKP-218ENST00000625299 ALG1L2C9J202 215 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 SLITRK5O94991 958 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 SRD5A1P18405 259 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.33
PNKP-218ENST00000625299 GUCY2DQ02846 1103 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.33
PNKP-218ENST00000625299 ZNF763Q0D2J5 394 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 ITGADQ13349 1161 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 PPA1Q15181 289 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 CYB5R2Q6BCY4 276 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 SZRD1Q7Z422 152 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
PNKP-218ENST00000625299 MMGT1Q8N4V1 131 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 ZNF525Q8N782 197 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 OR10H5Q8NGA6 315 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 OR4C3Q8NH37 302 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 CPNE4Q96A23 557 aaPredicted RBP13.02□□□□□ -0.33
PNKP-218ENST00000625299 ELP4Q96EB1 424 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 AMDHD1Q96NU7 426 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 SHCBP1LQ9BZQ2 653 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 TIGARQ9NQ88 270 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 POU2F3Q9UKI9 436 aa13.02□□□□□ -0.33
PNKP-218ENST00000625299 IGHV3-15A0A0B4J1V0 119 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 C7orf72A4D263 438 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 PRKD3O94806 890 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 INHBAP08476 426 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 HPGDP15428 266 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 SLC25A16P16260 332 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 GPC1P35052 558 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 PHBP35232 272 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 MAGEA12P43365 314 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 PRKAG1P54619 331 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 DSCR9P59020 149 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 FOXF1Q12946 379 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 HSPB3Q12988 150 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 SLC29A2Q14542 456 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 P2RY6Q15077 328 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
PNKP-218ENST00000625299 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
PNKP-218ENST00000625299 FCRLAQ7L513 359 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.01□□□□□ -0.33
PNKP-218ENST00000625299 TRABD2AQ86V40 505 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 TDRPQ86YL5 185 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 ATP6V1C2Q8NEY4 427 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 MUCL1Q96DR8 90 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 KCNA7Q96RP8 456 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 C1QTNF3Q9BXJ4 246 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 RAB17Q9H0T7 212 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 PRSS50Q9UI38 385 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 GRID1Q9ULK0 1009 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 POLR3HQ9Y535 204 aaPredicted RBP13.01□□□□□ -0.33
PNKP-218ENST00000625299 TIMM22Q9Y584 194 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms