RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 DSTNP60981 165 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 MRPS22P82650 360 aaKnown RBP11.56□□□□□ -0.56
PNKP-217ENST00000625216 PRR5P85299 388 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 RIPK1Q13546 671 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 LASP1Q14847 261 aaKnown RBP11.56□□□□□ -0.56
PNKP-217ENST00000625216 TRMT12Q53H54 448 aaKnown RBP11.56□□□□□ -0.56
PNKP-217ENST00000625216 EMC4Q5J8M3 183 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 PRAMEF20Q5VT98 475 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 GLYATQ6IB77 296 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 ERICH5Q6P6B1 374 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 OR2L13Q8N349 312 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 FBXO30Q8TB52 745 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 SPPL2AQ8TCT8 520 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 MIPOL1Q8TD10 442 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 CA5BP1Q8WTZ4 195 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 FIG4Q92562 907 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 RND1Q92730 232 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 DIO2Q92813 273 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 MAL2Q969L2 176 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 SDCCAG3Q96C92 435 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 HSPBAP1Q96EW2 488 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 MS4A4EQ96PG1 132 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 ANGPTL4Q9BY76 406 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 OR51I1Q9H343 314 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 EQTNQ9NQ60 294 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 DDX18Q9NVP1 670 aaKnown RBP11.56□□□□□ -0.56
PNKP-217ENST00000625216 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 PCDHGB3Q9Y5G1 929 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 A0A087WV62 115 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 TRGV5A0A0B4J1U4 118 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PRAMEF27A3QJZ7 478 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 HMGN4O00479 90 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 GSTA4O15217 222 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PLOD3O60568 738 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 TRIM3O75382 744 aaPredicted RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 SLITRK5O94991 958 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 HMGN2P05204 90 aaKnown RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 COX6B1P14854 86 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 DRD5P21918 477 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 ACVR2AP27037 513 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 ABCD3P28288 659 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 CHRNB4P30926 498 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PPICP45877 212 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 KHKP50053 298 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PSPHP78330 225 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 FUT5Q11128 374 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 EXOSC7Q15024 291 aaKnown RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 MAPK11Q15759 364 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 EXOSC6Q5RKV6 272 aaKnown RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 WLSQ5T9L3 541 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 MFSD12Q6NUT3 480 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 TMEM81Q6P7N7 255 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 NUP54Q7Z3B4 507 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 GALNT10Q86SR1 603 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 MCEMP1Q8IX19 187 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 C10orf67Q8IYJ2 551 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 TNIP2Q8NFZ5 429 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 OR5M3Q8NGP4 307 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 FAM110BQ8TC76 370 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 SLC26A7Q8TE54 656 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 PYDC1Q8WXC3 89 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 RAB8BQ92930 207 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 C16orf58Q96GQ5 468 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 RSRC1Q96IZ7 334 aaKnown RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 LCORQ96JN0 433 aaPredicted RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 ZNF597Q96LX8 424 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 LRGUKQ96M69 825 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 NSMCE2Q96MF7 247 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 SPOCK3Q9BQ16 436 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 YIPF4Q9BSR8 244 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 TRIM15Q9C019 465 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 NXF5Q9H1B4 397 aaKnown RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 TMEM38AQ9H6F2 299 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 ZNF703Q9H7S9 590 aaPredicted RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 C3orf14Q9HBI5 128 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 ACAD8Q9UKU7 415 aa11.55□□□□□ -0.56
PNKP-217ENST00000625216 FAF1Q9UNN5 650 aaPredicted RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 C19orf53Q9UNZ5 99 aaPredicted RBP11.55□□□□□ -0.56
PNKP-217ENST00000625216 GTF3C1Q12789 2109 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 PCNX1Q96RV3 2341 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 LRRC3CA6NJW4 275 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 AQP12BA6NM10 295 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 FAM47E-STBD1D6RA91 191 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 H0Y3Z8 333 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 H3BNX3 289 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 TO15178 435 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 WDR1O75083 606 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 GCM2O75603 506 aaPredicted RBP11.54□□□□□ -0.56
PNKP-217ENST00000625216 PPM1BO75688 479 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 STAMBPO95630 424 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 RFPL3SP0C7P2 107 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 OR12D1P0DN82 309 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 ACP2P11117 423 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 GABRA1P14867 456 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 MATN1P21941 496 aa11.54□□□□□ -0.56
PNKP-217ENST00000625216 CASP3P42574 277 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms