RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	APOA1	P02647	267 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	UGT2B4	P06133	528 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	PABPC4L	P0CB38	370 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	OR8G3P	P0DMU2	310 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	POU2F1	P14859	743 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	UGT1A6	P19224	532 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	MSR1	P21757	451 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	IER3	P46695	156 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	CCNH	P51946	323 aa	Predicted RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ARHGDIB	P52566	201 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	IST1	P53990	364 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	GSTO1	P78417	241 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	GPR50	Q13585	617 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	FASTK	Q14296	549 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	GNA13	Q14344	377 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	VWA2	Q5GFL6	755 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	LDLRAP1	Q5SW96	308 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ATL3	Q6DD88	541 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ARMCX5	Q6P1M9	558 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	KDM7A	Q6ZMT4	941 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897		Q6ZVH6	145 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	RFPL4B	Q6ZWI9	263 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	UBE2J2	Q8N2K1	259 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	CERS5	Q8N5B7	392 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	RNF10	Q8N5U6	811 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	LKAAEAR1	Q8TD35	194 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	U2AF1L4	Q8WU68	220 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	PDCD6IP	Q8WUM4	868 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	MAIP1	Q8WWC4	291 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	CIDEC	Q96AQ7	238 aa	Predicted RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ULK4	Q96C45	1275 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	TRNT1	Q96Q11	434 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	NUP58	Q9BVL2	599 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	FTHL17	Q9BXU8	183 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	SLC39A8	Q9C0K1	460 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	MTIF3	Q9H2K0	278 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	TMEM231	Q9H6L2	316 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	SP140L	Q9H930	580 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	WDR76	Q9H967	626 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	UCK1	Q9HA47	277 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ROPN1	Q9HAT0	212 aa	Predicted RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	NMUR1	Q9HB89	426 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	APMAP	Q9HDC9	416 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	TREM1	Q9NP99	234 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	PIGV	Q9NUD9	493 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	EMC3	Q9P0I2	261 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	STX18	Q9P2W9	335 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897		Q9UF83	564 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	PRO0461	Q9UI25	63 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	CHMP2B	Q9UQN3	213 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	MRPS33	Q9Y291	106 aa	Known RBP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	CBY1	Q9Y3M2	126 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	ATP6V1D	Q9Y5K8	247 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	SF3B1	O75533	1304 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	SH3TC1	Q8TE82	1336 aa		3.14	□□□□□ -1.91
BRCA1-229	ENST00000621897	BCLAF3	A2AJT9	711 aa	Known RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	OR5H15	A6NDH6	313 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	GABRR3	A8MPY1	467 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897		A8MUI8	341 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ZNF701	M0R085	212 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	HIP1	O00291	1037 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	LSM1	O15116	133 aa	Known RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CTDSPL	O15194	276 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CHMP2A	O43633	222 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ECD	O95905	644 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	KRT6A	P02538	564 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	SERPINF2	P08697	491 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	RRM2	P31350	389 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CA8	P35219	290 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	RORA	P35398	523 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CHI3L1	P36222	383 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ATP5C1	P36542	298 aa	Known RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	MAGEB1	P43366	347 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	SLC1A6	P48664	564 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	SST	P61278	116 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	IGLV3-21	P80748	117 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	TGM3	Q08188	693 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	PPIL2	Q13356	520 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CEACAM7	Q14002	265 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	MAPK6	Q16659	721 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ZSCAN26	Q16670	478 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	LRRC66	Q68CR7	880 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	LRRC8B	Q6P9F7	803 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	PAMR1	Q6UXH9	720 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	YRDC	Q86U90	279 aa	Known RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ECHDC2	Q86YB7	292 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CCDC71	Q8IV32	467 aa	Predicted RBP	3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	AQP12A	Q8IXF9	295 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	OFCC1	Q8IZS5	231 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	PARP8	Q8N3A8	854 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	TMEM99	Q8N816	258 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	ZNF781	Q8N8C0	355 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	SPATA4	Q8NEY3	305 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	OR9K2	Q8NGE7	335 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	GTSF1	Q8WW33	167 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	MCUR1	Q96AQ8	359 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	HAVCR1	Q96D42	359 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	B3GALT6	Q96L58	329 aa		3.13	□□□□□ -1.91
BRCA1-229	ENST00000621897	CYTH2	Q99418	400 aa		3.13	□□□□□ -1.91

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