RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OR2A14Q96R47 310 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 EGLN3Q9H6Z9 239 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CRYBA1P05813 215 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HCKP08631 526 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 NT5EP21589 574 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RPL3P39023 403 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ISL1P61371 349 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PLPPR4Q7Z2D5 763 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GPAT4Q86UL3 456 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 THOC6Q86W42 341 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF563Q8TA94 476 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RXFP4Q8TDU9 374 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ACTRT3Q9BYD9 372 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HAPLN2Q9GZV7 340 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SRA1Q9HD15 236 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 KLF15Q9UIH9 416 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CNTNAP1P78357 1384 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF670-ZNF695F2Z2N8 137 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RTCAO00442 366 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GNG10P50151 68 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SLC27A1Q6PCB7 646 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR52I1Q8NGK6 324 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ORAI1Q96D31 301 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 POP7O75817 140 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CXCL3P19876 107 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SLC25A46Q96AG3 418 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MRGPRX2Q96LB1 330 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF382Q96SR6 550 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MACROD1Q9BQ69 325 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DEFB129Q9H1M3 183 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MSL2Q9HCI7 577 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 NDRG3Q9UGV2 375 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ACOD1A6NK06 481 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GPR31O00270 319 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PMP2P02689 132 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GIPRP48546 466 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HCAR3P49019 387 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 IDH3GP51553 393 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ST8SIA6P61647 398 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MEDAGQ5VYS4 303 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TAS1R3Q7RTX0 852 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CREB3L4Q8TEY5 395 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FN3KRPQ9HA64 309 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ATG4BQ9Y4P1 393 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MYO9BQ13459 2157 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C11orf98E9PRG8 122 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SMIM10L2AP0DMW4 78 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SMIM10L2BP0DMW5 78 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GDI1P31150 447 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 WNT4P56705 351 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DAOAP59103 153 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 UBXN2BQ14CS0 331 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR2B11Q5JQS5 317 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SOHLH1Q5JUK2 328 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FOXRED1Q96CU9 486 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PGAP3Q96FM1 320 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PLCXD1Q9NUJ7 323 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HS3ST4Q9Y661 456 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RBMS1P29558 406 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GDNFP39905 211 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TGM3Q08188 693 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DPY19L1Q2PZI1 675 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM44Q2T9K0 475 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TMCO2Q7Z6W1 182 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR56B4Q8NH76 319 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GSN-AS1Q9NRJ2 163 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 A0A0D9SEW6 157 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C17orf102A2RUQ5 167 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TRABD2BA6NFA1 517 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MGST1P10620 155 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MAT2AP31153 395 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HLXQ14774 488 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TGIF2LXQ8IUE1 241 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FUBP1Q96AE4 644 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SDSLQ96GA7 329 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ULBP3Q9BZM4 244 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 LAMP5Q9UJQ1 280 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PCTPQ9UKL6 214 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PCDHGB7Q9Y5F8 929 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SLC7A4O43246 635 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 LRP3O75074 770 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GAS6Q14393 721 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ETV3LQ6ZN32 361 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C17orf64Q86WR6 236 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR4K5Q8NGD3 323 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 BRIX1Q8TDN6 353 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ELP5Q8TE02 316 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C4orf36Q96KX1 117 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RRAGCQ9HB90 399 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ADAP2Q9NPF8 381 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PCDHB11Q9Y5F2 797 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 A6NLC8 198 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SLC25A12O75746 678 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 HTR1AP08908 422 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OSMP13725 252 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ENPP1P22413 925 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 LYPLAL1Q5VWZ2 237 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CERS6Q6ZMG9 384 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms