RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 PRKAG1P54619 331 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 RPS3AP61247 264 aaKnown RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 VSNL1P62760 191 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 PON3Q15166 354 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 ZNF474Q6S9Z5 364 aaPredicted RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 SZRD1Q7Z422 152 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 GTPBP8Q8N3Z3 284 aaPredicted RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 PSMA8Q8TAA3 256 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 FBXO30Q8TB52 745 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 ACTRT2Q8TDY3 377 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 NANOS1Q8WY41 292 aaKnown RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 PERPQ96FX8 193 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 GIN1Q9NXP7 522 aa19.79■□□□□ 0.76
SRRT-218ENST00000620394 C6orf203Q9P0P8 240 aaPredicted RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 NUP214P35658 2090 aaPredicted RBP19.79■□□□□ 0.76
SRRT-218ENST00000620394 A0A1W2PQD3 144 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 CTIFO43310 598 aaKnown RBP19.78■□□□□ 0.76
SRRT-218ENST00000620394 NDUFB5O43674 189 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 SMNDC1O75940 238 aaKnown RBP eCLIP19.78■□□□□ 0.76
SRRT-218ENST00000620394 HSPA4LO95757 839 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 PSMA4P25789 261 aaKnown RBP19.78■□□□□ 0.76
SRRT-218ENST00000620394 FAM27E3Q08E93 113 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 C20orf204Q6ZNR8 217 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ZCCHC23Q6ZST2 131 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 GALNT10Q86SR1 603 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 MISPQ8IVT2 679 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 COX18Q8N8Q8 333 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 TCP10LQ8TDR4 215 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 AENQ8WTP8 325 aaKnown RBP19.78■□□□□ 0.76
SRRT-218ENST00000620394 PGM2Q96G03 612 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ADGRG7Q96K78 797 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 STACQ99469 402 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ROPN1BQ9BZX4 212 aaPredicted RBP19.78■□□□□ 0.76
SRRT-218ENST00000620394 UBTD1Q9HAC8 227 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ROPN1Q9HAT0 212 aaPredicted RBP19.78■□□□□ 0.76
SRRT-218ENST00000620394 UBQLN4Q9NRR5 601 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 DUSP22Q9NRW4 184 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ELOVL5Q9NYP7 299 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 ZNF226Q9NYT6 803 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 VDAC3Q9Y277 283 aa19.78■□□□□ 0.76
SRRT-218ENST00000620394 DSCAMO60469 2012 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 DEFB108AA8MXU0 73 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 SHISA8B8ZZ34 492 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 ALOX5P09917 674 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 EFNA1P20827 205 aaPredicted RBP19.77■□□□□ 0.76
SRRT-218ENST00000620394 SERPINB4P48594 390 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 PRIM2P49643 509 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 ACKR1Q16570 336 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 CTU2Q2VPK5 515 aaKnown RBP19.77■□□□□ 0.76
SRRT-218ENST00000620394 PLPPR5Q32ZL2 321 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 FIGNL1Q6PIW4 674 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 OR7A2PQ8NGA2 310 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 ZBTB8AQ96BR9 441 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 C16orf58Q96GQ5 468 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 BTBD2Q9BX70 525 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 OPN3Q9H1Y3 402 aaPredicted RBP19.77■□□□□ 0.76
SRRT-218ENST00000620394 ZCCHC3Q9NUD5 404 aaKnown RBP19.77■□□□□ 0.76
SRRT-218ENST00000620394 FBXO34Q9NWN3 711 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 STOML1Q9UBI4 398 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 GIMAP2Q9UG22 337 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 ADAM21Q9UKJ8 722 aa19.77■□□□□ 0.76
SRRT-218ENST00000620394 A0A1W2PRB8 838 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 SIAH2O43255 324 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 SPAG7O75391 227 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 LYPLA1O75608 230 aaPredicted RBP19.76■□□□□ 0.75
SRRT-218ENST00000620394 AQP8O94778 261 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 HMGN2P05204 90 aaKnown RBP19.76■□□□□ 0.75
SRRT-218ENST00000620394 LAMP1P11279 417 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 UGT2B10P36537 528 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 SIRPAP78324 504 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 PTGR1Q14914 329 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 ATP6AP1LQ52LC2 224 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 FAM214BQ7L5A3 538 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 AGR3Q8TD06 166 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 C3orf30Q96M34 536 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 NPAS1Q99742 590 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 MED17Q9NVC6 651 aa19.76■□□□□ 0.75
SRRT-218ENST00000620394 CHD3Q12873 2000 aaKnown RBP19.76■□□□□ 0.75
SRRT-218ENST00000620394 ADAMDEC1O15204 470 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 GMFGO60234 142 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 CRYGSP22914 178 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 ETV4P43268 484 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 POU6F2P78424 691 aaPredicted RBP19.75■□□□□ 0.75
SRRT-218ENST00000620394 IFFO1Q0D2I5 559 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 LASP1Q14847 261 aaKnown RBP19.75■□□□□ 0.75
SRRT-218ENST00000620394 CD226Q15762 336 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 C6orf136Q5SQH8 315 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 CDC73Q6P1J9 531 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 EMBQ6PCB8 327 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 WDR75Q8IWA0 830 aaKnown RBP19.75■□□□□ 0.75
SRRT-218ENST00000620394 NATD1Q8N6N6 113 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 GATSQ8NAP1 163 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 JADE3Q92613 823 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 PIK3IP1Q96FE7 263 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 OTUB1Q96FW1 271 aaPredicted RBP19.75■□□□□ 0.75
SRRT-218ENST00000620394 WFIKKN1Q96NZ8 548 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 GSX2Q9BZM3 304 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 PIGUQ9H490 435 aa19.75■□□□□ 0.75
SRRT-218ENST00000620394 PAQR5Q9NXK6 330 aaPredicted RBP19.75■□□□□ 0.75
SRRT-218ENST00000620394 COL6A5A8TX70 2615 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms