RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 LCTP09848 1927 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 SLC22A31A6NKX4 558 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 OR2AT4A6NND4 320 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PDCD5O14737 125 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PCDH17O14917 1159 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ZNF182P17025 639 aaPredicted RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 KIR2DL1P43626 348 aaPredicted RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 SLC6A8P48029 635 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 CDK5R2Q13319 367 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 TSSK4Q6SA08 328 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 BMFQ96LC9 184 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PHOX2BQ99453 314 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 QRSL1Q9H0R6 528 aaKnown RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 SPNS1Q9H2V7 528 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 GPR83Q9NYM4 423 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PRPH2P23942 346 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 TAS2R43P59537 309 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 MAPK14Q16539 360 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ENTPD8Q5MY95 495 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 RAET1LQ5VY80 246 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 LHFPL3Q86UP9 236 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 OR5T3Q8NGG3 340 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 OR6N2Q8NGY6 317 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 COX14Q96I36 57 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 UBQLN4Q9NRR5 601 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 TRPM6Q9BX84 2022 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ITGA10O75578 1167 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PAPLNO95428 1278 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 P04436 131 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 GNAO1P09471 354 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 BSGP35613 385 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 DCAF7P61962 342 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PODNL1Q6PEZ8 512 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 QSOX2Q6ZRP7 698 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ATOH1Q92858 354 aaPredicted RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 ISOC1Q96CN7 298 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ELF4Q99607 663 aaPredicted RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 GAL3ST1Q99999 423 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 SLC25A37Q9NYZ2 338 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CDC14CA4D256 554 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 PNMTP11086 282 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CELP19835 753 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 HOXC12P31275 282 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ZP2Q05996 745 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 EFR3AQ14156 821 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ZNF385BQ569K4 471 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 FAM219BQ5XKK7 198 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 OR14A16Q8NHC5 309 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 TRUB1Q8WWH5 349 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 PISDQ9UG56 409 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 MICAL3Q7RTP6 2002 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ALPLP05186 524 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 IL9P15248 144 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CAPZBP47756 277 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 MTNR1AP48039 350 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 TIAL1Q01085 375 aaKnown RBP eCLIP12.97□□□□□ -0.33
CIITA-213ENST00000618327 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 FRMD6Q96NE9 622 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 MGLLQ99685 303 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ORAI3Q9BRQ5 295 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 ZNF639Q9UID6 485 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 TMPRSS11EQ9UL52 423 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 PABPC4LP0CB38 370 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 MAP3K8P41279 467 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 DCDP81605 110 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 TOMM5Q8N4H5 51 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CCDC74AQ96AQ1 378 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 FKBP7Q9Y680 259 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 NDUFB2O95178 105 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 PRR35P0CG20 571 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 HSD11B1P28845 292 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
CIITA-213ENST00000618327 TMBIM6P55061 237 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 SPHARQ15513 63 aa12.97□□□□□ -0.33
CIITA-213ENST00000618327 EIF5AL1Q6IS14 154 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms