RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 HOPXQ9BPY8 73 aaPredicted RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 TREX2Q9BQ50 279 aaPredicted RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 SLC39A3Q9BRY0 314 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SPATA9Q9BWV2 254 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 DSN1Q9H410 356 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 IKZF5Q9H5V7 419 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 TAS2R10Q9NYW0 307 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 MED11Q9P086 117 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 TAGLN3Q9UI15 199 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 ZNF232Q9UNY5 417 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SLC35A3Q9Y2D2 325 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 L3MBTL1Q9Y468 752 aa12.08□□□□□ -0.48
MDC1-209ENST00000613547 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
MDC1-209ENST00000613547 FXYD1O00168 92 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 ZNF264O43296 627 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 NUDT14O95848 222 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 CELA3AP09093 270 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 ARAFP10398 606 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 IL7RP16871 459 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 PTGS2P35354 604 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 ADH7P40394 386 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 ZNF41P51814 821 aaPredicted RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 CASP6P55212 293 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SUMO3P55854 103 aaPredicted RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 CDK6Q00534 326 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SCARB2Q14108 478 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 LARS2Q15031 903 aaKnown RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 ZSWIM7Q19AV6 140 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 LIN52Q52LA3 116 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 RABL3Q5HYI8 236 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 REEP3Q6NUK4 255 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 HACD2Q6Y1H2 254 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 TRILQ7L0X0 811 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 OLIG3Q7RTU3 272 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SERPINA11Q86U17 422 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 CMIPQ8IY22 773 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 TMCO5AQ8N6Q1 288 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 HIPK4Q8NE63 616 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 OR52P1PQ8NH57 321 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 B4GALNT2Q8NHY0 566 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 NFKBIDQ8NI38 313 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 WDR60Q8WVS4 1066 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 MAL2Q969L2 176 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SARAFQ96BY9 339 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SH3YL1Q96HL8 342 aaPredicted RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 ZNF607Q96SK3 696 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 SPATA5L1Q9BVQ7 753 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 RTN4RQ9BZR6 473 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 TRIM8Q9BZR9 551 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 OR2B2Q9GZK3 357 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 RUBCNLQ9H714 662 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 BCL2L10Q9HD36 194 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 FBXL2Q9UKC9 423 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 ANGPT4Q9Y264 503 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 CARD8Q9Y2G2 431 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 IFT52Q9Y366 437 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 MRPS18CQ9Y3D5 142 aaKnown RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
MDC1-209ENST00000613547 DSPPQ9NZW4 1301 aa12.07□□□□□ -0.48
MDC1-209ENST00000613547 A0A087WZY1 265 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 A0A1B0GTH9 108 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 A0A1B0GVC2 190 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 OR14I1A6ND48 311 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 AQP7O14520 342 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 ADAM10O14672 748 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 BCKDKO14874 412 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 GMFGO60234 142 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 SLC19A2O60779 497 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 PGM3O95394 542 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 ZIC2O95409 532 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 ETS2P15036 469 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 GNLYP22749 145 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 RNF144AP50876 292 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 P2RX1P51575 399 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 CCR4P51679 360 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 KCNJ10P78508 379 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 HSF1Q00613 529 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 ZNF117Q03924 483 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 MRPL49Q13405 166 aaKnown RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 SELPLGQ14242 412 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 RPS26P11Q5JNZ5 115 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 INTS11Q5TA45 600 aaKnown RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 AAGABQ6PD74 315 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 NET1Q7Z628 596 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 YRDCQ86U90 279 aaKnown RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 FAM83FQ8NEG4 500 aaPredicted RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 OR10A6Q8NH74 314 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 NEIL3Q8TAT5 605 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 QRSL1Q9H0R6 528 aaKnown RBP12.06□□□□□ -0.48
MDC1-209ENST00000613547 SLC6A15Q9H2J7 730 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms